Detailed information of alvinactis_v1_g2760 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_2:136711...163409
NR annotation: XP_020904819.1, nuclear cap-binding protein subunit 1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q09161Nuclear cap-binding protein subunit 1 OS=Homo sapiens OX=9606 GN=NCBP1 PE=1 SV=1
Q5ZJZ6Nuclear cap-binding protein subunit 1 OS=Gallus gallus OX=9031 GN=NCBP1 PE=2 SV=1
Q6DIE2Nuclear cap-binding protein subunit 1 OS=Xenopus tropicalis OX=8364 GN=ncbp1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09088MIF4G_likeMIF4G likeRepeatInterproscan
PF09090MIF4G_like_2MIF4G likeRepeatInterproscan
PF02854MIF4GMIF4G domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003890DomainMIF4G-like, type 3Interproscan
IPR015172DomainMIF4G-like, type 1Interproscan
IPR027159FamilyNuclear cap-binding protein subunit 1Interproscan
IPR015174DomainMIF4G-like, type 2Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12412CAP BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016070Biological ProcessRNA metabolic processInterproscan
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0000339Molecular FunctionRNA cap bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005845Cellular Componentobsolete mRNA cap binding complexInterproscan
GO:0005846Cellular Componentnuclear cap binding complexInterproscan
GO:0006406Biological ProcessmRNA export from nucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12882NCBP1, CBP80; nuclear cap-binding protein subunit 1-Spliceosomeko03041deepkoala

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