Gene detail

Detailed information of alvinactis_v1_g26697 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g26697	UNCHARACTERIZED	chr_14	10250765	10287419	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g26697

ATGGCGGCTGCATCTCCCGTTCTAGACGATCTCATCAAGGAATACTTGCTGTTCAGAGGTTTTACCTCTACTTTGAAAGCTTTTGAGAATGATATCAAGGCAGATAAGGACAAGAGTTTTAAGGTTAACAGAATTATGGACCAGCTCCTTGTATATGTATCAACATATGACATTTCCTCCTTGAGAGAATACTGGGAACATTTAGATAAAAGATTCTTCAAAAGACTAGATTATCAACATTACAATAATGTACGGAAACTGGAGACATGTTTACTTCGACTGTATGTTATACATGCTATACAGAACTCTAAGCAAGACAAAGTGGTTGAATTTTTTGAGAAATATGTGACGGAACTCCAACCTCAAAGTGATTGGAGAGAATGGTTTGCCATTCCTTTTATCAAGAATCCAGAACAGAATACAACATTTGAAATGTACTTCCAGAAGTCGTGGCAAGAAACTTTTTATTTATCTCTTCACAATTTTCTCATCACACTCTTTCATCATTTACCCATGCCTACGTTGTTACATTATGACAAAGAGCGAGGCATTCAGCAGAAACTAGAGGAACAAGTAACAAAGTTGAAACAACAAGTAGTAGAATTGGCTGATCAAATGGCTGATTTACAGAGAAAAATCTCAAAACTGACTACTGAGCTGGAAGAGAGAAAAATACAAGTTGGGGAAACGTTGGAAGATGAAGATGAGGAGTTTCTTGTTGTTTGCAAgatcatcaatagttatgatggtgatgctgctattgccgatgattctggatcatcaatagttatgatggtgatgctgctattgctgatgattctggtgatcagtggtgatgatggcaatgatgatggcgatgatgatgattacaatgattctggtgatcagtgtggtgatgatggcaatgatgatggcgatgatgatgattacaatgattctggtgatcagtggatcatcaatagttatgatggtgatgctgctattgctgatgattctggtgatcaatgTCAAGGGAAAACAGTACAACAAAAGCAACAAATACTTAAACAGAAAGATCAGGAAATACTACAGGAAATGCAAGACCGAGAGAGGTTACTAAATGCGATTAAAGAAGAGCATATACCTGGAAAAGCTTCCCAGAATCAGGATATTCCTAAAGAAAATGGTAACCTTTCTAAAACCGAGTCCACTATGCCCACAACATTAGGGAAGTCATTGAGTTTTGACTCGGGTATAAATGAAAGGGCTTACAGTAAAGATGATGGTGATAAAACAGCTTTGAAAAGGGCTCGTACTATGCCTAGTAATAGTGGTCGTACTTCTCTACCTAGAGAAAGTAAAGTTACAGATGATTTACTTCAACCGAAGACTGTTCGTTTTGAAGAGAATGATGAACCAAAACCTTTTATTCACCTTGGGCAGGAGGAGTACAAGGAGCATCACTCGGGTGTAGTCCATTGTAGGTTCTCGTCAAGTGGAAGAGTGATTGCCAGTTCTGATTCTGATGGAATTGTAAAGGTATGGACGAGCCATCCTGACATCAGGACCTGTGCAACGTTAATGTCTAAGTCACCTTTGCTCTCCTTGGAGTGGGCATCGAAACCTGAGAGACTTCTTCTCTTAGGCACAGGCCACGGGAAGGTACGTTTCTACGACACAGAAAATAAGAAAACGATTTGTGATGTGTCAACTGATTCGCTTTATCCAAGGGTTGTATCTTTATCATGCAGCCCTACTGGGACAGCGTTCGTTTGTTCAGCTGCAACCTCTAAGAAATCTGGCACGTCGACATTGCGTCTTAGTTCTCACTCTCCCAAAGGAAGTCTAAATGACGTCATGGGGACGTCATCCAATGGAAGGCCTTCGAATGAGGGCGTGTTACAGTGTTGGGACATGAAAGCCATGAAAATAGAACGTAGCTTACCAGTCGACCCCGCCCCAGTCTGTATAAACTGTACTGCGTATAATCACAACGGGACTCTCCTTGTTACTGGTGGTGCTGACGGGATGATACGCTTATTTGACATGCGCTCGTACGACTGTTTAATGGGTATGCACGCACACGAGGGTGAAGTGTGTTGTGTACAGTTCAGTGTTGATGAAACTACGATATACAGCATGGGCTTGGATGGAAAGTTTCTCCAATGGAGCGTACATCGCATGGGTCAAAAAGTAGCTGATCTTAACATACACGATGGTGCAGTGTTAAAAAGCTCGCTACGACCCAACCAAACACGTGGTTTCAGTGGCGGAGGCTCGTATGGTAGACTGTTTGCTTTCGACTCTGAAGGACAACATGTACTCACATGTGGACCACAAAGTGGACTCATCTATAAGtttcacgagcgacgcaagcataagcgaacCTGGGAGACAGAAGGAGCTCAAGTCCCCAAAGAATCCGTGGAAAAGCTGCTCAAATCGTTCCTCTACGCTGAGCAAATTCGATGGATGGAAAGTGACCAGATATCGGCTGCTGAAACAGCTAAAGAACAAAGTCCAACACATGAGGCCAGATggttcatgcaagaatgtgtatgtagtGTAAGTTCCGTTGATCCAAATCCTCAAAGTCACCAAGAGGGAACAACAGCAGCAGTAAACGAGCAAGGTGCATTAAGTGATCAGGATTGGCAACTCTATGAGATGGCTGTCCAGTGTTACCAGTCCCCCTATTTGAGTGCTCCACCTGCCCCTTCACCTTATTCACCATCTTCATCGCCAACTGCTTCCTCAAGTTCTTATCAGGTTGGATTTGATGAGTTCTCTTATAGTCCTCCACCCAGGGCACAGATCCACTCGCCATTTCGGTTCAGAAGGTTTTCATTCAGAACTGGAACTTCTCCTGAACCAATTCCTCCTGCTAATCCAACCACAATGAGAGAATTGGTCAGGAAGACGTTTGGACTAAGTAAAGCAGTGCACACAACTCAGGAAAAACTACTCAAAGAAAAAATGCAACCCAAAAATAGTGAGAGGGTTCTTGTCGAAGACTTATTAACCCAGCTCTACTTCTTGAACAACAACTGTCATCCATTCTACCGTATACAAAGTTTCCTAGACACAAATGGTTACGATGAGTGGATCACTGCAGAAAAGGAGAACATCAGCAAGCTTATCAAGGTCTTTTGGCATTTTCCTCTTCCTCCCTGCCCTTCTGCTTATCCTTTAAACCAGTTTGATGCCCATCAAGGATACATAATCCTGCTCAAAAAGTTTGTTAGACATGAGAGTACCAACAAGACCACTCATTCTGTGTTTGGTGATGTCACGCCAACTGGTCCACTGTCCCTTGCTGCTTGCCGAATCCTCAAAGAGTTTGGCCTGCGATATGGTGTTGGAGAACTGTACAGAAAATTGGTGTATCTTAGATATCTAGTGAATCACTTTGAGTACAAGTTATGGTTCATCCAACATGTAAAAACACTACTTGAGGATGTAATGACATTGGTGACCATCACACCTGAGATTTATGTCAAAGAAGAATTTGTAATGTTGCTACACATCCTTACTCTCGTACTTCGTCTCTCCAAATATTACCTCACTCGTGTGACACGACTCTTCCCCAAAAACTCTCCACCCGGCGGAGTGACGTCACTCGTTATCATCGCAGAGTTGGTGCAGGACGCTGCTCTTTACGTTCGAGAACAATTTCCATCAGTTTTCTCGGTGATGATAATGAGAGAAGTTGTACGTGAATTTATGGATAATTTAGAAGACGCACCATTTGAAACGCTGCTGATCAGCTACTTAAAAGAGGAAATCGAAGGACGCTACGAACGGTTTAAAGTCATAGCCGCAGACAAGCTGGAAGTGGATTGTTACGAGCTCGCGCTGACGCCCCATGTGCTCAACATTCTCATTTACGACATCCAAGAAGAGATCACAATCTATAAGACGTACTATCAGTGTGAATTTGAACGATATGCAGATTTTGTACAACTCGCCACCGTCACCTTCTACCAGCTGCTCATGACTGATGTCCAGGAAATGTGCCTACACTTACCAGGAAACACTCGTAGGGATAAAGTAGATCTAAGGATGCTCGCACTAGCTTACAGACTTTCCATTCTGGACAAAGATATGGCTAAATACTTGAACCCAGAGATGCAGACTTGGCGTGAACCATTCTTACAACTCTCATTAACCTGGATTGATATCGTTGGACGTCATCTAAAACGGTTGATCCCAGTCCTCCTTGAGAAAGAACCATGGCGTGCGGTGGAAGTCACACGAGATGACGTCAAAGCTAAGGCTGTACTAACGAGTAAAGTACTGAAGATTACTTGTGAACAGTCGTTATTTACTCGGTCAGAAAACTCTGCCTTCAGAAAAGTTGGAAATGACGACTCAGAACCTGTGTCGAAAAACCAAGGGTTTTCTGTATCCAACCCCAATCTGTTATCCATACCAAGAACTGACCACGCTGACTCGAGTGAGAACTCGTTAGTCGCCAATCAGCCTTCTGTAAGTCAATCGTCTTGTACTAAAGTGGTTGCTAATGATACACAGCTCAAGCCATCCAGCTTGACAACCAAGCCAGACTTCAAAGGCCAAATCATAATTACCAAGGCTATTGTACATGTTCCTAAGAGAACCGATAGCATAACGACCGCTGATGGAGGTCTTTCTCAAAGCTGCCCCATTGAAGATCTCTTCATTCATTGCGATTCATCAGATTCGGGAAAGAATATCGAAGACATTGATAAGAGCTACGAGCAAGAGAGCAAGGAATCTGATGACATGAAAAGTAAACCCGTACCTGAGAAATCACGTGTAGACTACCCAGACAGCTTTACTGGTTTTACAGGACAAGAAAGTGAGACAggtcagaccagtcgaactggacagaccggtcaaacaggggaaactggtcaaataggaaaaactggacagaccggtcaaactggagaaactggtcaaatagaaaaGGTCAGTCAAACAGGAGAGACGACCAATGAACAACAGACCATTCAGAACAGACATATCGGTCTACCTGGAAAgaccgatcagaccggatcgaccggtcaaaccggattgaccggtcaaGCGGAAAAGAAAAACACATCTTCTGATATCACCAGTTTAGACAATTTATCAAGTCAAACCGGACAGACTGGTCAGGCAATGGACCGGGAAGGCACTCCCTATGAAAATGCTGACATGGATAGTAGTGCTACAAGTAGTAACTACAAAACGGGTCCTGTCTATCCAGACTTATTAAACATCGAAAAAATATGTACACGTGCATTGGAAgtcgcatctcctacatcggatgtcgtatgtgctgtatcggatgtcgtatgtcctgtatcggatgtcgtatgtcctgtTAGCGATGCGTTGGAAGATTCTAAAGCACCAATACCCAGCGCGACTGATCAGGAAATTTCGACGCTGTTTATCGGTGCAGAGGGTGAAAATGCTACCATGACAACCAAAAAACGCTGTGAAAACTGTCCACGTAAAGTCACAAAAGTCGTACCCGACATCGAAGACGCATCGATCAGTGACACAGTTACAGTCGCTAAGAATGTAAGGCTTCACATCCCAGACGACGACTGGAACAAGCCAGGGCCCTCTGGCCTACAAGCACCGTTAATTCCTGCCAACCAGCACCTATCAAAAGTCCTCGAATCTGACGTAACAAGCCTACGAAGTGCGCCTTCAGAATACGGCAGCCTTCCGTCACGCGTGACTGTCACGTCATATGAAACAGCGCGTTACAGTAGTGATCGAACTACCAGAAGCTCCGATTTTGAGAGTACATTCACAACTAGCTATGAAAGCTGTAGTGACTCCAGCTCAGATGAGCCTCGCACTGCCGAGGATGATACCCCAAGGACAGAGGTGCTGCCGGTCAGCAGTAGCGTCGTTGATCTTCTTTGTTGCGTTAATCGTTTAACTGCATTCACTTGTCACTTGTGTTCTATCTTGTGCCCTTGTTTTGATGGGATGGATGATGATCAGGAGCGAAACGCTGCGGATTGTTGTGTGTTGTTTTTGTGGAGGGAAGTGCGGACTGGGTCAGAGCGAAAACGCTGCGGCGGATTACTGCATTCAGGTAAGTCTTTCCTTGGTATGTAA

Transcript

alvinactis_v1_g26697

Protein

alvinactis_v1_g26697

MAAASPVLDDLIKEYLLFRGFTSTLKAFENDIKADKDKSFKVNRIMDQLLVYVSTYDISSLREYWEHLDKRFFKRLDYQHYNNVRKLETCLLRLYVIHAIQNSKQDKVVEFFEKYVTELQPQSDWREWFAIPFIKNPEQNTTFEMYFQKSWQETFYLSLHNFLITLFHHLPMPTLLHYDKERGIQQKLEEQVTKLKQQVVELADQMADLQRKISKLTTELEERKIQVGETLEDEDEEFLVVCKIINSYDGDAAIADDSGSSIVMMVMLLLLMILVISGDDGNDDGDDDDYNDSGDQCGDDGNDDGDDDDYNDSGDQWIINSYDGDAAIADDSGDQCQGKTVQQKQQILKQKDQEILQEMQDRERLLNAIKEEHIPGKASQNQDIPKENGNLSKTESTMPTTLGKSLSFDSGINERAYSKDDGDKTALKRARTMPSNSGRTSLPRESKVTDDLLQPKTVRFEENDEPKPFIHLGQEEYKEHHSGVVHCRFSSSGRVIASSDSDGIVKVWTSHPDIRTCATLMSKSPLLSLEWASKPERLLLLGTGHGKVRFYDTENKKTICDVSTDSLYPRVVSLSCSPTGTAFVCSAATSKKSGTSTLRLSSHSPKGSLNDVMGTSSNGRPSNEGVLQCWDMKAMKIERSLPVDPAPVCINCTAYNHNGTLLVTGGADGMIRLFDMRSYDCLMGMHAHEGEVCCVQFSVDETTIYSMGLDGKFLQWSVHRMGQKVADLNIHDGAVLKSSLRPNQTRGFSGGGSYGRLFAFDSEGQHVLTCGPQSGLIYKFHERRKHKRTWETEGAQVPKESVEKLLKSFLYAEQIRWMESDQISAAETAKEQSPTHEARWFMQECVCSVSSVDPNPQSHQEGTTAAVNEQGALSDQDWQLYEMAVQCYQSPYLSAPPAPSPYSPSSSPTASSSSYQVGFDEFSYSPPPRAQIHSPFRFRRFSFRTGTSPEPIPPANPTTMRELVRKTFGLSKAVHTTQEKLLKEKMQPKNSERVLVEDLLTQLYFLNNNCHPFYRIQSFLDTNGYDEWITAEKENISKLIKVFWHFPLPPCPSAYPLNQFDAHQGYIILLKKFVRHESTNKTTHSVFGDVTPTGPLSLAACRILKEFGLRYGVGELYRKLVYLRYLVNHFEYKLWFIQHVKTLLEDVMTLVTITPEIYVKEEFVMLLHILTLVLRLSKYYLTRVTRLFPKNSPPGGVTSLVIIAELVQDAALYVREQFPSVFSVMIMREVVREFMDNLEDAPFETLLISYLKEEIEGRYERFKVIAADKLEVDCYELALTPHVLNILIYDIQEEITIYKTYYQCEFERYADFVQLATVTFYQLLMTDVQEMCLHLPGNTRRDKVDLRMLALAYRLSILDKDMAKYLNPEMQTWREPFLQLSLTWIDIVGRHLKRLIPVLLEKEPWRAVEVTRDDVKAKAVLTSKVLKITCEQSLFTRSENSAFRKVGNDDSEPVSKNQGFSVSNPNLLSIPRTDHADSSENSLVANQPSVSQSSCTKVVANDTQLKPSSLTTKPDFKGQIIITKAIVHVPKRTDSITTADGGLSQSCPIEDLFIHCDSSDSGKNIEDIDKSYEQESKESDDMKSKPVPEKSRVDYPDSFTGFTGQESETGQTSRTGQTGQTGETGQIGKTGQTGQTGETGQIEKVSQTGETTNEQQTIQNRHIGLPGKTDQTGSTGQTGLTGQAEKKNTSSDITSLDNLSSQTGQTGQAMDREGTPYENADMDSSATSSNYKTGPVYPDLLNIEKICTRALEVASPTSDVVCAVSDVVCPVSDVVCPVSDALEDSKAPIPSATDQEISTLFIGAEGENATMTTKKRCENCPRKVTKVVPDIEDASISDTVTVAKNVRLHIPDDDWNKPGPSGLQAPLIPANQHLSKVLESDVTSLRSAPSEYGSLPSRVTVTSYETARYSSDRTTRSSDFESTFTTSYESCSDSSSDEPRTAEDDTPRTEVLPVSSSVVDLLCCVNRLTAFTCHLCSILCPCFDGMDDDQERNAADCCVLFLWREVRTGSERKRCGGLLHSGKSFLGM*

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR039724	Family	WD repeat-containing protein 91	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13083	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0031313	Cellular Component	extrinsic component of endosome membrane	Interproscan
GO:0031901	Cellular Component	early endosome membrane	Interproscan
GO:0031902	Cellular Component	late endosome membrane	Interproscan
GO:0035014	Molecular Function	phosphatidylinositol 3-kinase regulator activity	Interproscan
GO:0043551	Biological Process	obsolete regulation of phosphatidylinositol 3-kinase activity	Interproscan
GO:0045022	Biological Process	early endosome to late endosome transport	Interproscan
GO:0051898	Biological Process	negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction	Interproscan
GO:0141039	Molecular Function	phosphatidylinositol 3-kinase inhibitor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-