Detailed information of alvinactis_v1_g26618 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_14:8875470...8888638
NR annotation: XP_020907510.1, RNA-binding region-containing protein 3 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F1Q8J0RNA-binding region-containing protein 3 OS=Danio rerio OX=7955 GN=rnpc3 PE=2 SV=1
Q4G055RNA-binding region-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Rnpc3 PE=1 SV=2
Q96LT9RNA-binding region-containing protein 3 OS=Homo sapiens OX=9606 GN=RNPC3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR034147DomainRBM40, RNA recognition motif 1Interproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR045164FamilyRNA-binding region-containing protein RBM41/RNPC3Interproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16105UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005689Cellular ComponentU12-type spliceosomal complexInterproscan
GO:0030626Molecular FunctionU12 snRNA bindingInterproscan
GO:0097157Molecular Functionpre-mRNA intronic bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13157RNPC3; U11/U12 small nuclear ribonucleoprotein 65 kDa protein-Spliceosomeko03041deepkoala

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