| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g26523 | TRANSCRIPTION FACTOR SOX-30 | chr_14 | 7181149 | 7182387 | + |
| CDS | |||||
| alvinactis_v1_g26523 | |||||
| Transcript |
| alvinactis_v1_g26523 |
| Protein |
| alvinactis_v1_g26523 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | HMG |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00505 | HMG_box | HMG (high mobility group) box | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR009071 | Domain | High mobility group box domain | Interproscan |
| IPR036910 | Homologous_superfamily | High mobility group box domain superfamily | Interproscan |
| IPR052856 | Family | SOX30 Transcription Factor | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47279 | TRANSCRIPTION FACTOR SOX-30 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000981 | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:1990837 | Molecular Function | sequence-specific double-stranded DNA binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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