Gene detail

Detailed information of alvinactis_v1_g26348 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_14:4377024...4379330
NR annotation: XP_020900236.1, uncharacterized protein LOC110238886 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g26348

ATGGAGCAACAGAGCGTTACGGAGTCTCATGCATGCTATTCAAAGCAAAACGAGTTTCGTCAACAAGACCAGTTGCTTAACTTTACCAATTCCGTTGTTGTATTAGAAAGTGAAATTTGTCAGAAATTAAGAAATCCAAGCCACATAATCCAAGGTAGTAACACAACTCCCCAACTACCCAGAGGCAATGAAGAATTAGTTCTGAAAGAAGATCATGCAAATTTTAATAGCGACAAAATCCCAGACAAGTACTTAACACAATTTTCTCGCGAGGAAAGCAGTACACAAATGAATCAATTTCCCATTGTTGGGGGAAAACATGAGGAGTGGATATCAAACAGGGAGAAATACGGACTGCAAGATGAAACATCAAATCTACAGACAACTGATAAAGATCATCCTAACGCTCTCAATACGATACAGTTGTCGAGAGTGTATTTCTCACAGCAGACTACAACAGCCAAAGGAAATCAAACTTTACAAGAAGCGCAAATAACAGAGCACCAAATATGCGACAAAGGGCTGGAAAGTAGTGATGACAATGTTAGGAAAAACTCCAAGAAGCGACAAAAGGCTTGCGTAACATTTGATGATGTAATTCCTGGAAAGAGATCAATGACTTACAGAAGTCCAAATGCTCGTTGCATGGCGTCCGTCAACAAGCCAAATCTAAAAGGACTGTTTCAGAGTTCTTCAAGTTTTGCAAAAGTTCACAAGAAAAATGTCTCCACAACCCAACCTGACCAGTATGTTTACTTTTTATCGGGATCTGGAAGTTCTACTAGACCGCATTATCCCAAAATCCAAGAAAAACTTTCTTCAATTAAAGAGTTTGGCATGGAAGAGAGAGGAAATTTGTCCAGTAAGAAAGATGGCTTTTCAGAATCTCCACAGATGATGTGTGGGAATGGAAATAGGGCGTGTTCTAAGGAAAGTAAAGATGCATCAGAACAGGTGCACGTGGTGGCAGACAACGACGGACGTGTACTTGTTCGTGTAGTTAATTCCAGTCCAAAGAAGAAATCCGCAGTAAAAATTGACTCACTGGCAGTTCAAAATCCATCAGCTGTGCTGTTTAGAGGGTCCGAGAAATATTCGAATAACGAAAGACTTATTCAAAATTCAACTACTTTGATATCTCCATCGTCTCAGACAAAACATATTTGCGTCAAAACAAAGAAAGACGGTACATATGAAATTATGAACAATCCATCCCTCATTATGCAATCAAAAAGTGTATCACATTCAACTAGAAGCAGGACTGATATTAAAAAGACGGTTAATGATAATAATAACAATGCTGTTGTCCATGGGGTCCAGTTGGTGGACAATCATGGCGGAAACAATACTAAGAAAAATGTACGTGGCGTTATGCTCCCTAAAAAGTGCGGCGATTTGAAAAACAACCAATTTTTTGATTCACAACTTGGAAAGGTATCTAACAATGGTCTGCCTGTATACAACAGTACAGATGATGCTGCGACAACCAGACGAAGTGATTCAAATACCAACGAAACAAACAAACAACTCGGCCCAGACAAAGCTCTCAGAATCCCCACAAACTCTTACTGTTCCAAACACAATGCGGATCCATCAACCATTGTCTGCAATCCAGTAAATAATAATGATGGAACATTCGATCACTGCCATGCAAGTTCGGAAGGAAAGTCTGCAAATAGTATTCTGCAAATAGATCAGTCAGAGCAGCCTTACATGGTTGAGGGGAATCCTTTCTGTACTCGCCTTAAAGACAAACAAACAATAACTTCAGGGGTGAGGCTTAGCGACAATGCGGCTGGTACAGATCAGAGGGTGGCGAAGAATCAGCATGAGCCACAGCGCGTGACTCAATATGGACTACAAGGCAATAGAGTAGATATTAAAGAAGGAAAAGAGCTTAGTAAAAAGACCCCTACACAGTCAAGAAATGAAGATGTCACGGTCACTTCACACAGCCAAACCAACTGTTCTGAGTCTAGTGATGAACTAAGATATAAATGCGACTGGCCGGCCTGCACAAAAGCATTCCGTCATTACTCCTTTTTGGTTCTTCATAAACGTATTCACACTGGAGAAAGGCCTTATTTGTGTACATGGGAAGGATGTAAAAAGCAATTCCGACGATCAGACGACTACCAAAGGCACTACCGTGTGCATACTGGAGCCAAGCCTTATCCTTGTATTATATGTGGTAAGGCGTTCAAGCGTTCTGACCACAGACTGTTTCATTACAGGGCTATACATAACATTAAGGACGACAGTAGAAGAATAAATAAACTGAAAAGTGGACAAAGCTGGTGCAGATGA

Transcript

alvinactis_v1_g26348

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23235	KRUEPPEL-LIKE TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09205	KLF8_12; krueppel-like factor 8/12	-	Transcription factors	ko03000	deepkoala