Detailed information of alvinactis_v1_g25425 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_13:17776182...17966013
NR annotation: XP_020913496.1, LOW QUALITY PROTEIN: probable ubiquitin conjugation factor E4 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NR09Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6 OS=Homo sapiens OX=9606 GN=BIRC6 PE=1 SV=3
O88738Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6 OS=Mus musculus OX=10090 GN=Birc6 PE=1 SV=2
Q11076Probable ubiquitin-conjugating enzyme protein 17 OS=Caenorhabditis elegans OX=6239 GN=ubc-17 PE=3 SV=3
 Gene family
Gene familySubfamily
Ubiquitin FamilyE2|UBC|UBC
Ubiquitin FamilyUBD|UBC-like|UBC

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00179UQ_conUbiquitin-conjugating enzymeDomainInterproscan
PF10408Ufd2P_coreUbiquitin elongating factor coreFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000608DomainUbiquitin-conjugating enzyme E2Interproscan
IPR019474DomainUbiquitin conjugation factor E4, coreInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR045132FamilyUbiquitin conjugation factor E4Interproscan
IPR016135Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR002048DomainEF-hand domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13931UBIQUITINATION FACTOR E4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0034450Molecular Functionubiquitin-ubiquitin ligase activityInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0036503Biological ProcessERAD pathwayInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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