Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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Genomic Location: chr_13:16116755...16122577
NR annotation: XP_020912081.1, nucleolar protein 9 isoform X1 [Exaiptasia diaphana]
| CDS | |
| alvinactis_v1_g25360 | |
| Transcript |
| alvinactis_v1_g25360 |
| Protein |
| alvinactis_v1_g25360 |
| Uniprot term | Description |
|---|---|
| E3RP32 | Nucleolar protein 9 OS=Pyrenophora teres f. teres (strain 0-1) OX=861557 GN=nop9 PE=3 SV=1 |
| B2W8X8 | Nucleolar protein 9 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) OX=426418 GN=nop9 PE=3 SV=1 |
| C5MFB4 | Nucleolar protein 9 OS=Candida tropicalis (strain ATCC MYA-3404 / T1) OX=294747 GN=NOP9 PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00806 | PUF | Pumilio-family RNA binding repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR040000 | Family | Nucleolar protein 9 | Interproscan |
| IPR001313 | Repeat | Pumilio RNA-binding repeat | Interproscan |
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13102 | NUCLEOLAR PROTEIN 9 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000056 | Biological Process | ribosomal small subunit export from nucleus | Interproscan |
| GO:0000447 | Biological Process | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0000472 | Biological Process | endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0000480 | Biological Process | endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| GO:0030686 | Cellular Component | 90S preribosome | Interproscan |
| GO:0030688 | Cellular Component | preribosome, small subunit precursor | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14790 | NOP9; nucleolar protein 9 | - | Ribosome biogenesis | ko03009 | deepkoala |