Gene detail

Detailed information of alvinactis_v1_g24730 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g24730	PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED	chr_13	8123458	8148530	+

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g24730

ATGGCCGGCAGAGGAGTACTGATAGCTCTATTCGTGATACATTTGTCGTACAACTTTGGCGAAGCGTTTCGCCTGCGAGCTCGTTTCCCTACTTCACCAACCAGCGTCAACGAAAGGTCATCGAAGAAGTCAGTCTGTCCGTATTGTAAGTACGAGACAAAGTACTACGAACAAAAGTTGGATCACTTTGATTATAACACCAACAAGACATTCCTTCAACGATACCTGGTCAGCAACAAGAATTGGAAAGCAGGCGGACCTATATTCTTTTATACCGGAAATGAAGGAGACATCGTGTGGTTCGCCAATAATACGGGTTTTATGTGGGATAACGCAAAGGAATTTGGAGCCATGTTGGTGTTTGGTGAACACAGATACTACGGTAAAACCCTGCCTTTTGGGAAACAATCATACGAAGGTCCAAAGTATCTGGGGTTTTTGACATCAGAACAAGCTCTCGCAGACTTCGCAACTCTTATTCGTCATATAAAGGTAACGATTTCTGGAGCCAAAGACAGTCCCGTTGTTGCTATTGGTGGCTCATATGGAGGCATGTTAGCGGCGTGGCTTCGAATGAAATATCCCAACATCGTTATCGGAGCTTTAGCAGCCTCTGCTCCGATTCTGCAGTTCCAGGACCTGACACCTTGTGGGAGTTTCTACAAAATTGTGACGGATGACTTTCGCCATGACGGTGGTCAAGTGTGCGTTGACTCGATTAGAAGATCGTGGGCCATCGTTAAAAAGTTGGGAGAGACTGCTAGTGGTCGTCAAAGTCTGTCCAAGATCTTCAAAGTTTGCGCGCCGATAAAAACTCAAGACAACGTTACCGCGTTAACAAACTGGTTGAGTGAGACCTGGACCAACTTAGCCATGGTCGATTATCCCTACGCAGCCAATTTCCTGGAACCTCTACCCGCCTGGCCGATCAAGGTAACCTGCTCGAAACTACAAGACAGCGACCTCCCAGATGCCAAGCTACTCGGTGCAATAGCCGATGCGGTGGGAGTTTATTACAACAGTTCTGGAAAAACCAAGTGTTTTGATACTGCACAACAGGCCGTGTCGGCACTCGGAGATAAGGGATGGTACTTCCAGGCTTGCACGGAGATGGCAATGCCACTTTGCAGTGATGGAATTAATGACATGTTCACTCCAGAAAAGTGGGACTTCAAAGCCTACGCTGAGGGGTGCCAAGAGTCACAGCAGGTAACACCACGTCAATACTGGATTGAGACCCAATTTGGCGGCCGTAAAATCGAGGCCCACAGCAACATTGTATTCAGTGGAATTCTTGTGAATCAAGACCTAACGCTTGGGGAAAACAGACGACCGAAGAGAAAGGCTAGAGATACTGTCATCTCTAAAGCAATATCTAAAAGACTTAGAAAGTCTCTACGAACCAAGGTTAACATAAGAATGGCAGAGACTCTCTGTAAGACAGAGGGAAGTATCAGCTCATTCAGAAACATAGAAAAAGGAATAACAAGCAGCAACAGGATTTTAAAAGAAAGAACACTAACAGACAATTTAAAAAATACACTGTTGAAAAGTGACAGGCAAACATCTAGCTTTACATTTTCAAATTTTTTTCTCCCTGTTGTCCGCAAACTGACCCCATTACCTGAGCTTAATTGGACCAGCTCTGAAGAGCTCTGGTCTCACATGTTGGAGCGAGACAGAAAATACACGAGGGATGCACTGTATTTAAGGGTTCATAAACATTTACTACCAAGAATGAGAAGTATCTTACTTGATTGGTTGATTGAGGTTTGTGAAGTTTACAGACTACACAGGGAGACATTCCATCTGGCAGTTGACTTCATAGATAGATATCTGTCAGTTCAACATGACATTCCTAAGCAACGATTGCAGCTAATTGGAACAACGGCACTCTTTATTGCAGCAAAAATCGAGGAAATCTACCCACCCAAGTTGTCAGAATTTGCTTATGTAACGGATGGCGCATGCACAGAGGAAGAAATCTTACAACAAGAGTTGGTCATGCTCAAGGATTTGAAATGGAACCTTTGTCCTGTCACATGTAATACTTGGCTAAACATCTTTCTACAGCTCTACTGGCTTTCATCATTTCGAAATGATCCTAAAATAATTCCACACAGATTCAACTTTGTTTATCCCGAGTACTCACAAAAGGACTTCTTAAAAGTGGCCGAGCTTTTAGATTTGTGCTGCTTAGATATCGGGAGTCTTCACTTCTCATACAGTATACTGGCGTCATCTGCATTGTACCATGTGCTTCCCGTGAACATTGAGGATATTACAGGGCACAAGTGGGAGGAGCTGTATCCATGTATTCAGTGGATGAATTCATTTGCGGCAGCAATCGGAGATAATGGAGAACCTGTCCTACGAAAATTTGACCATGTGAAGCAAGAGGATGCACATAACATTCAAATCCACAACAATAACTTAACAATGCTGGAAAAAGCACAGTCCCAGGTAGTACCATTACCAGAGCGCTGTTCGCCAAGCCCACCAGTACCCACTCACTTTGCACCCTTGACTCCACCCGATAGCACCAAAAAGACTCAGCCAATGCAATCCAGTCTACAATAA

Transcript

alvinactis_v1_g24730

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00134	Cyclin_N	Cyclin, N-terminal domain	Domain	Interproscan
PF02984	Cyclin_C	Cyclin, C-terminal domain	Domain	Interproscan
PF05577	Peptidase_S28	Serine carboxypeptidase S28	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004367	Domain	Cyclin, C-terminal domain	Interproscan
IPR006671	Domain	Cyclin, N-terminal	Interproscan
IPR008758	Family	Peptidase S28	Interproscan
IPR013763	Domain	Cyclin-like domain	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR036915	Homologous_superfamily	Cyclin-like superfamily	Interproscan
IPR042269	Homologous_superfamily	Serine carboxypeptidase S28, SKS domain	Interproscan
IPR048258	Conserved_site	Cyclins, cyclin-box	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11010	PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008239	Molecular Function	dipeptidyl-peptidase activity	Interproscan
GO:0070008	Molecular Function	serine-type exopeptidase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-