Detailed information of alvinactis_v1_g24264 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g24264RNA-BINDING MOTIF PROTEIN 14Bchr_1320573852072179+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|RBR

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF01485IBRIBR domain, a half RING-finger domainDomainInterproscan
PF04408HA2_NHelicase associated domain (HA2), winged-helixDomainInterproscan
PF07717OB_NTP_bindOligonucleotide/oligosaccharide-binding (OB)-foldDomainInterproscan
PF21010HA2_CHelicase associated domain (HA2), ratchet-likeDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR002464Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan
IPR002867DomainIBR domainInterproscan
IPR007502DomainHelicase-associated domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR011709DomainDEAD-box helicase, OB foldInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR044066DomainTRIAD supradomainInterproscan
IPR048333DomainHelicase associated domain (HA2), winged-helix domainInterproscan
IPR051945FamilyRRM MRD1 RNA Processing and Ribosome BiogenesisInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR48039RNA-BINDING MOTIF PROTEIN 14BInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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