Detailed information of alvinactis_v1_g239 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g239INTEGRIN ALPHAchr_146865044757772-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00637ClathrinRegion in Clathrin and VPSRepeatInterproscan
PF01839FG-GAPFG-GAP repeatRepeatInterproscan
PF08441Integrin_A_Ig_1Integrin alpha Ig-like domain 1DomainInterproscan
PF10367Vps39_2Vacuolar sorting protein 39 domain 2DomainInterproscan
PF20805Integrin_A_Ig_2Integrin alpha Ig-like domain 2DomainInterproscan
PF20806Integrin_A_Ig_3Integrin alpha Ig-like domain 3DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000413FamilyIntegrin alpha chainInterproscan
IPR000547RepeatClathrin, heavy chain/VPS, 7-fold repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR013519RepeatIntegrin alpha beta-propellorInterproscan
IPR013649DomainIntegrin alpha, first immunoglubulin-like domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR019453DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2Interproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR048285DomainIntegrin alpha, second immunoglobulin-like domainInterproscan
IPR048286DomainIntegrin alpha, third immunoglobulin-like domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23220INTEGRIN ALPHAInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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