Detailed information of alvinactis_v1_g2372 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_1:39006434...39047864
NR annotation: XP_020907109.1, LOW QUALITY PROTEIN: general transcription and DNA repair factor IIH helicase subunit XPB-like [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1RMT1General transcription and DNA repair factor IIH helicase/translocase subunit XPB OS=Bos taurus OX=9913 GN=ERCC3 PE=2 SV=1
P19447General transcription and DNA repair factor IIH helicase/translocase subunit XPB OS=Homo sapiens OX=9606 GN=ERCC3 PE=1 SV=1
Q60HG1General transcription and DNA repair factor IIH helicase/translocase subunit XPB OS=Macaca fascicularis OX=9541 GN=ERCC3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04851ResIIIType III restriction enzyme, res subunitFamilyInterproscan
PF16203ERCC3_RAD25_CERCC3/RAD25/XPB C-terminal helicaseDomainInterproscan
PF13625Helicase_C_3Helicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006935DomainHelicase/UvrB, N-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR050615FamilyATP-dependent DNA HelicaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR032438DomainERCC3/RAD25/XPB helicase, C-terminal domainInterproscan
IPR001161FamilyHelicase XPB/Ssl2Interproscan
IPR032830DomainHelicase XPB/Ssl2, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11274RAD25/XP-B DNA REPAIR HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0000112Cellular Componentnucleotide-excision repair factor 3 complexInterproscan
GO:0005675Cellular Componenttranscription factor TFIIH holo complexInterproscan
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan
GO:0097550Cellular Componenttranscription preinitiation complexInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10843ERCC3, XPB; DNA excision repair protein ERCC-3EC:5.6.2.4
DNA repair and recombination proteinsko03400deepkoala

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