Gene detail

Detailed information of alvinactis_v1_g23333 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g23333	BILE ACID BETA-GLUCOSIDASE-RELATED	chr_12	13228737	13254701	+

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g23333

ATGGGATTATTTCAAGTATTTCTTCTATTCTCTATCATCCAAGTCAATATATGTTCCCTTGATGTCAATATGAAGGAAAAGCTTGTTTCAAGAACTTCTCATGCCAAGATAATAAGGTCGTTGGAATCTCTTGTAGACAACGAGGATCAATCCAGGGGAAATCCACGTTTCAGAATTCTCCGATCTCTGGAAAATTTTGTGGACAACAATAGCCCTATCAGTCCAAAAAATCCAACATCATCTGAAAAAGCTGTGATCAATAAATCTTTGGATATGAATCCATCTAAAGAAAATGAAGGACATAGTGGCGATTCTAGTAACGAAGTTATTGGTGCTTCTGGTTCTGGAGCCGAGAACTTGAAAGACTCTACACTTCACAATAATGACAACGAAAATGACAATTCGGTCTCTTCATTGGAAAATGTTGGCAATTCAGCTCAGGATTTGAAGAACTCTACATTGCAAAATGTTGGTGGGACAGCACAACCATTGAAGGCCTCGCAGGTATCCAATGATGGCCTTGGATTCCAGGATAACGCATTGCAGACAAATAGTAACCAAGTGCATGGCTCGAGGACATCCACAAGAGATGATGAGAATTCAAGTGAAAAATTGAAAGCTGCTGCATTCCATAATGTTGTTCATTCTGCAAGTGAGAGCAAGGCAAACTTTGAGCATCACAAAGTTGTTGATGAGGGAACAAACTCACAAAGAACTATTGAGGATACAACGAGATTCATACGCCATAACGACAGAAGTACAAATACGGTCTTCGCAAAGGGACAACTTTCGCAAGGTCTGGAACTTGCTCAACGGCAATATGCAAACACATTTGTGCAAGGAACAAACATAAAGACTGATGTAACAAACAGTGAAAAGCATATTATTAAAGTTTCATCTTCTTCTAGTGAAAACATAGAAGATGGCAGTTCATATTCAGGCTCGGCGGAAGACCAGgaaactgtcgaggaaagtatacaagattcgagcggcgaagatggcgtccgggaagtcccatctgtacaagtggagactgtcagtgcacgtccaggttcggccaggaaggaagaaactgtcaaggatagtatacaagaatcgagaggcgaagatgatgtccagcatagcccatctttaaaagtggagactgtcagtgcacgttcaggttcggcgaggaaggacgaatctgtggaggaaagtatacaagaatcgattggcgaaaataacgtccggcaacgcccatctgtacaagtgtatgtacaagtggagagtgtcggtacacgttcagtttcggcaagaaagaaagaaactgtcgaagaaagtacacaagattcgagcggcgaagatgatgtccggcaaagaccatctgtacaagtggagagtgtcggtgcacgttcagtttcggcaagaaaggatgaaactgtcgaagaaagtacacaagattcgagcggcgaagatgatgtccggcaaagaccatatgttcaagtggagagtgtcggtgcacgttcagggtcggcaagaaaggaggaaactgtcgaggaaagtacacaagTCTTAAATGGAAAAGGAGATGATGTCCTGACAAGTGGTGAAGGTAGCACTTCAGAAATATTACCCCAATATCAAGCTAGTGGAAATAGTATCAGAAAATCCTCTCCAGAGTCTACTAAGGTGGAAACAATATCTGAACCTGATGTTTATGTAATTGTTGATGAAAACAGAAGTCCTGCTATTTCGAGTGAGAATTTATCTACCAATCATAGCCAAACAACTTCTGAAGATTCACAACAGATGGAAGGCATACGAGAATTGAATATACGCATTGATTTTAATAGGTTACGAGACAAGCTACCAAGAAACAACACAGTCACCGCCTCTCCGATGAAATCGAATGACTCTACAAGCGATGTAGAGGGTAGTGGTATGTTAATTGACAAGGAAATGCCGCCCAAGATTCAGAAAAATCTACAGAGATTAATGCATTTTATCTATCATAATAATAGCAAGCCAGAAATGATTAAAAATAGCACAGTAGCTGAAGTACTAGACAAGTTACCAAGTAAAATAAACAACACAGTCGCCGCCTCTTCGATGAATTCGAATGATTCTACAAGCCATGCAGAGGGTAGCGGTATGTTGATTGATAATGACATTCATCCTAATATTCAACAAAAGCTACAGACATCAATGCATTTTATCTATCATAATAATAGCAATCCAGAAATGATGAAGAATATCACCACGGTAGATGAAGAAGTAGAGCAAGAGAAGAAGCTCATAGCTCTCTCTACAAAGACAGCACAGTTCGCCACTTCAAACAATATCACTCTACAGCAAAATAATCGGTTTAAATATACTAACAAGACTACGAAAGAAGTAAAACAAGACTACGATTTAACAATAGAAAAAGAAAAGAAGCTCATCGCTGCTTCTGTAAAGGACTCTGAGAATGAAGGACGAGTTGCTGATGCAAATAAACCAAGTAAGGTACCAAACTCTGCAGAACTGCACGGCCATGCAAAGGCTACATTTCAATCAAGATATTTTGAAAAGAAAGGGAGAAAAGTTATTAAACAATATAAAGAAGACAAGTTGGCTAGTCTCCTAGATGCTATAAAGTTTGGTAAAGCACCTTCGACTGTTAAGAAGACAATGGAGTTTCGTTACCTAAAACAATGCGGATTGTTTGTAGAAGATTACAATGTAACTAAGACTGGTGAGTCGTGGAGCGGAGGTATATTGTCCCAGTATAAATACATCTACGAAATACCAGAACATTTCTCCAAATGCTCAACGGCTGCCTGGTTCAATCATACGGACATGCGCGGTAGTGTTTTCTTAAGTTTCCAAGTGAGAAGCATTCTGGGTAATACAATGATGAACAATGCGCGCGTTTGCTCCAAGTACTGTTGTCATGAGCCTCGATGTAAAGCATGGACGTTAAGGATACAGGAAGGCGAGACACGGAACTGCGATAAAGGTGCATATTGCTGCTGGCTCAAGAGCGCAGTACCCGAAGTTCACTCTGGTGTAGACAACAGTACATCCGGGATAGTGGATCGTGTGCATACTAAACACCCACCAACGGGCATGCGCTCTGCAGTACCGCTTGGAGGAATTACCACGGGCTCATTCGAGCTTCATGCGGACGGCACCTTTCACGAATGGACAATCGAAAACCAGTCGCCCGGTGGATCAGCAAAGTTAAACAACGGAGCCCTCAATATGGCGCTACTTGGTGTACACGTGACTAGAAAAAATACAAGCGAGGCGGCATTGTTGAGGACACATCCCCCACAGGGGTACCCTGGGGTTGAAGCGTTGTCGTATTCGGGGGCTTATCCAGTCACTAAATTAACACCAGttggtaggatcaCGGATCAACTCAAAATGGACCTCTACGCGTACTCGTCATTCCAACAAAGAAATCCATACCATTCCGCGATTCCTTCAGTAGCGTTTACACTAAGTTTAGAGAACCAAGACCAGCACGAGCCAATGAACGTATCATTTCTGTTGAACCTTCCACTTGGATACCAAGATGATACCATACGAATTGGTGATAACTTTGGAGAGGTTGTCTTTACAAAGAAAATTCTCCCATCGCAATGTGCTAAAGCATGCGCAAAGATGCCAAAGTGCATGGCGTGGACCACTAATGGCCCAACAGCTTGTCTCCTTAAAGATAAAATGCCCCTCCACGCCTGGCAGAATGGGATTATTTCGGGATTGAAGGGCGTGTGGTCTAAAAATGGATCCACGTTGAATATGAAAAGACCAGGATTTTTCCCACAAAGTGGAAGTACAACACTTTATGCCGTGGGAGGGGAGGGTGAAACCACGTCTTTTGCAGTTGCGGATGATTTCGGAGATGTATGGAACCACTTTGCAGAAACAGGGTTGGCAGGCAACACCACCAACATAACAAAATTCGGTCTACATGGATCAGCCTCGATCCAAACCTCTCTACAACCTGGCCAGAAAAAGTCACTGACTATCATCATGTCCTGGCACTACCCGAACCGTGACCATGCCAACGTGAACATCGGGAACTTCTACAGTAATTTATTCACTTCCAGCAAAGGAGTTGCACTGCACATGCGCGAACATCTCCTACAGACCGTGACGAACATTCTAGAATGGCAAGCACCGTTTCTTCTTCCGAGCTCCTTCGTCGAAAAGCATAACCACGTGACCAGACTGCCACTGTGGTTGAGTGACGTATTGATGAACAGCGTCAGCTTTTGGAGGTCGTCGTTCTGGACGAAGGATGGACGTTGGAGACAGTGGGAGGCGTATGATTGTAATGATATTGATACTATACACAATGATATGCAAAGAATACTGCCTTACATGCTGTTTTACCCAGAGGTTGTTCGTCATTTGCTGTTGTCATGGGCTGCTAATCAATACACTAATGGAATGATGCAAGAAACACTGACAGAAGGATGTATGGGACCCACTGGAAAACTTGACTACGCAGGAGGTCGTGTAATGGCTGACAGTACGTCAATGTTTGTAGTCGGTGTATATCAATACTACAAGTGGGTTGGGGACAAGGATCTTCTCGCCAAGCTTTGGCCTGCCTCAAAGAGAGCTATCACGTGGTTGATTGTCGACAGCACAAAAGGCACAGGGCTACCGTTAAGAAAAACGACGTTTTACAGCCTGTCTGGAATCGACAAGTACGATCATCACATCTACGATAGCGTTGTCTATCTCCTGGCTTTGCATGCAGCACGTGACCTAGCTGCACGTTTAAGGGATGACATATTTAAGAGAACTGTCATCGCTGCCATACATAGAGCAGAGTCATTGATAGAGAAGGAGTTTTGGAGCAAATACTATAATCACTATCGGGCGTGGTGGGACATGGAGTATGGCGCTGGTGATTGGCTGATGTCTGATTCCTTTTATGGGCAGGTGTGGGCTTATACACTCGGCCTTGGAGACCTGGTACCGAGAACGAAGCTAAGACGCCATCTTGATTCTGAAGTTGTCATTAACGGCTCACCCTGGGGACTTCGAGTTGTCGACGATAATAGGCCAGCGATGACGGAGGAGGACACTTCTCTAATTCTAAGTTACAGATATCCCGGATGTGAATCTCTGGAAAACATCTCGCAGCATAAATCAATCTGGATGGGAGCTGACGCTAACTGGGCATCGCTGATGCTCAATCTAGATACGGATCCACACAAAGCCTTAGATCAAGCAAAGAAGCCACTTGATCACTGGAGATCAACCCTCAATGACCAATGGAACATCCATGGGCAAATGTCCTCAGGGGGTGTAGCAGccttacatctggcaccaccctcacacctggcaccaccctcactacctggcacaaccctcacacttcgcaccacccggcaccacctcacacctggtaccaccctcacacccggcaccaccctcgcaccaggcaccaccctcatacctggcaccaccctcacactcggcaccacactcacacctggcaccaccctcacacctggcaccaccctcacacctggcaccaccctcacacctggcaccaccctcacacctggcaccaccctcacacctggcaccaccctcacacctggcaccaccctcacacctggcaccaccctcacacctggcaccaccctcacacctggcaccacccttatacctggcaccaccctcacacctggcaccaccctcacatctcacatctggcaccACCCTTATACCGGAGCCGGAGAaggaatggaggaaaggaggaatggaggaaaggaggaatggaggaaaggaggaaaggaggaaaggaggaaaggaggaaaggaggaaaggaggaaaggaggaaaggaggaaaggaggaaaggaggaaaggaaataaggaagaacggaggaaaggaAGGGAAGAAGGAAGTACAAATACATTATCGACCTTCACCGGTATAA

Transcript

alvinactis_v1_g23333

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04685	DUF608	Glycosyl-hydrolase family 116, catalytic region	Repeat	Interproscan
PF12215	Glyco_hydr_116N	beta-glucosidase 2, glycosyl-hydrolase family 116 N-term	Family	Interproscan
PF14295	PAN_4	PAN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003609	Domain	PAN/Apple domain	Interproscan
IPR006775	Domain	Glycosyl-hydrolase family 116, catalytic region	Interproscan
IPR008928	Homologous_superfamily	Six-hairpin glycosidase superfamily	Interproscan
IPR011004	Homologous_superfamily	Trimeric LpxA-like superfamily	Interproscan
IPR012341	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR024462	Domain	Glycosyl-hydrolase family 116, N-terminal	Interproscan
IPR052566	Family	Non-lysosomal glucosylceramidase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12654	BILE ACID BETA-GLUCOSIDASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004553	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0008422	Molecular Function	beta-glucosidase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-