Detailed information of alvinactis_v1_g22943 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_12:6321505...6328770
NR annotation: XP_020892450.1, epsilon-sarcoglycan [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O70258Epsilon-sarcoglycan OS=Mus musculus OX=10090 GN=Sgce PE=1 SV=2
Q6YAT4Epsilon-sarcoglycan OS=Rattus norvegicus OX=10116 GN=Sgce PE=2 SV=1
Q29S03Epsilon-sarcoglycan OS=Bos taurus OX=9913 GN=SGCE PE=2 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05510Sarcoglycan_2Sarcoglycan alpha/epsilon N-terminal domainDomainInterproscan
PF20989Sarcoglycan_2_CSarcoglycan alpha/epsilon second domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048346DomainSarcoglycan alpha/epsilon, N-terminal domainInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR008908FamilySarcoglycan alpha/epsilonInterproscan
IPR006644DomainDystroglycan-type cadherin-likeInterproscan
IPR048347DomainSarcoglycan alpha/epsilon second domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10132ALPHA-/EPSILON-SARCOGLYCAN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016012Cellular Componentsarcoglycan complexInterproscan

TOP