Detailed information of alvinactis_v1_g22764 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_12:3121947...3123194
NR annotation: XP_020916796.1, E3 ubiquitin-protein ligase SIAH1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P61092E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus OX=10090 GN=Siah1a PE=1 SV=1
Q920M9E3 ubiquitin-protein ligase SIAH1 OS=Rattus norvegicus OX=10116 GN=Siah1 PE=1 SV=2
Q8IUQ4E3 ubiquitin-protein ligase SIAH1 OS=Homo sapiens OX=9606 GN=SIAH1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21361Sina_ZnFSina, zinc fingerDomainInterproscan
PF03145Sina_TRAFSina, TRAF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013010DomainZinc finger, SIAH-typeInterproscan
IPR018121DomainSeven-in-absentia protein, TRAF-like domainInterproscan
IPR004162FamilyE3 ubiquitin-protein ligase SINA-like, animalInterproscan
IPR008974Homologous_superfamilyTRAF-likeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45877E3 UBIQUITIN-PROTEIN LIGASE SIAH2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0031624Molecular Functionubiquitin conjugating enzyme bindingInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08742SIAH2; E3 ubiquitin-protein ligase SIAH2EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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