Detailed information of alvinactis_v1_g2237 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_1:36853295...36871704
NR annotation: XP_031564702.1, cytoplasmic dynein 1 intermediate chain 2-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O14576Cytoplasmic dynein 1 intermediate chain 1 OS=Homo sapiens OX=9606 GN=DYNC1I1 PE=1 SV=2
O88485Cytoplasmic dynein 1 intermediate chain 1 OS=Mus musculus OX=10090 GN=Dync1i1 PE=1 SV=2
Q0III3Cytoplasmic dynein 1 intermediate chain 2 OS=Bos taurus OX=9913 GN=DYNC1I2 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11540Dynein_IC2Cytoplasmic dynein 1 intermediate chain 2FamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025956FamilyCytoplasmic dynein 1 intermediate chain 1/2Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR050687FamilyDynein Intermediate ChainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12442DYNEIN INTERMEDIATE CHAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005868Cellular Componentcytoplasmic dynein complexInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0010970Biological Processtransport along microtubuleInterproscan
GO:0045503Molecular Functiondynein light chain bindingInterproscan
GO:0045504Molecular Functiondynein heavy chain bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10415DYNC1I, DNCI; dynein cytoplasmic 1 intermediate chain-Cytoskeleton proteinsko04812deepkoala

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