Detailed information of alvinactis_v1_g22305 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_11:20113972...20145410
NR annotation: XP_032231017.2, mutS protein homolog 4 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O15457MutS protein homolog 4 OS=Homo sapiens OX=9606 GN=MSH4 PE=1 SV=2
Q99MT2MutS protein homolog 4 OS=Mus musculus OX=10090 GN=Msh4 PE=2 SV=1
F4JP48DNA mismatch repair protein MSH4 OS=Arabidopsis thaliana OX=3702 GN=MSH4 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05192MutS_IIIMutS domain IIIDomainInterproscan
PF05190MutS_IVMutS family domain IVDomainInterproscan
PF05188MutS_IIMutS domain IIDomainInterproscan
PF00488MutS_VMutS domain VDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007696DomainDNA mismatch repair protein MutS, coreInterproscan
IPR036678Homologous_superfamilyMutS, connector domain superfamilyInterproscan
IPR000432DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR007861DomainDNA mismatch repair protein MutS, clampInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011184FamilyDNA mismatch repair Msh2-typeInterproscan
IPR045076FamilyDNA mismatch repair MutS familyInterproscan
IPR036187Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan
IPR007860DomainDNA mismatch repair protein MutS, connector domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0007131Biological Processreciprocal meiotic recombinationInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08740MSH4; DNA mismatch repair protein MSH4-Chromosome and associated proteinsko03036deepkoala

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