Gene detail

Detailed information of alvinactis_v1_g21580 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_11:10413657...10442923
NR annotation: XP_031562476.1, kinesin-like protein KIF2A [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g21580

atggcaagtccggagttctccagagaaactcttccttctcgtgtgAAACAAGCCAGGAGCCGTGCTAGAAAGCTCAACAGTGGATTACGACCCAGCATGGAGATGTACAGCAAGGTTGTGGTGGGCGCAAAGGTCGATATTCAACGAACTGACGGTCGCGTCCATTCATCTCTTGTCAGTGGAGTGAATCTAGACACTAAAAGTGTGACAGTTGAATGGTATGAAAATGGAGAAACCAAAGGAAAAGAGATTGAGATTGATCAAGTAATGTCACTGAATCCAGCTCTCACTGTACAGCCTAAACCTAAACCAGTAGCTGTATCAAATAAAAGGATAGCCAATACTCCTAATAATGTCAAGAATGCAAAAGTCCCTGAGTCCAATGCTGCTCCTTCGCCAAGAGCTGCAAGAGCCAAGGGTGAAAAACAACAACCCGTTAATGAAGGAGAAAATGGAGGTCCAGATGCTGCACAAAGAAAGGATAGTACCAGCTCAAATCCATCAAATCGAAGGAGGTCAAATTGTGTTAAAGAGGTAGAGCGACTAAAGAAGAACAGAGAGGAACGAAGGGCAATGCAGTTAGAACAGAAAGAACTACAGTTAAAATTACAACAACAATATGATCCTGGAAACCCAGACTGGCAGTTTATACAGATGATAAGAGATTATCAAGAATCATTAAGCTTTAAAGCCATAACTATGAATGAACCTGTTGGTGACCATCAAATATGTGTTTGTGTTCGTAAAAGACCACTCTCTAAAAAGGAATTGAATAGAAAAGAAATAGATGTTTCTACCATCCCAGATACTGACATTTGTATGGTTCATGAGTGTAAATTGAAAGTGGATCTGACCAAGTATTTGGAAAACCATAAATTTTGGTTTGATTATGCTTTTAATGAATATGCCACCAACGAGATGGTTTACCGGTATACAGCTAGACCACTTGTGGAGACTATATTCAACCAAGGAATGGCTACATGTTTTGCATATGGACAGACTGGCAGTGGCAAGACCCATactatgggtggtacattCACTGGTAGACAACAGGACTCATCTAATGGTATCTACGCTTTAGCAGCTCACGATGTCTTCAAACTTCATAAACATTCTAAACACAAGAACAAAGACCTTGTGATCTCATGTAGTTATTTTGAGATTTATGGCAGTAAGGTCTTTGATTTACTAAACAAAAGAAAGAAACTACGAGTCCTTGAAGATGGTCATCAACAAGTACAGGTTTGTGAGTTGGAAGAGAAAATAGTGCACTCTGTACAAGACGTGCTGAAACTCATCGATCTTGGTAACAAACTTAGGACGTCAGGGCAAACCTCTGCCAATCAGAACTCGTCTCGGTCGCATGCTGTATTCCAAATTGTCTTAAGAAAAAGAGGCTACAGTAAAGACGGCAGTGGAGGCAATCTATTTGGCAAATTTTCACTCATCGACCTTGCAGGTAACGAGCGTGGTGCAGACACGTCGACCTCTGACCGACACACACGACTAGAAGGAGCAGAGATCAACAAGAGTTTACTCGCGCTTAAGGAGTGTATACGTGCTCTTGGACGTAAAGGAGCTCATTTACCATTCCGTGCTAGCAAACTAACAGGAGCTTGGCCTGAAAATAGGAGCCATCGACCTGGTCCTGGTGATGGTGGAGATCCTGTAGATGAAGGCAAGAATGGTGCTCTATCGCCCATGGGAGACAAGATAGTTAATAACCAAGACTTGGCCATGCTCTGCACGCACAGCGGAATGGGTGACCAGTCTCAAGATCTGTACACATTCCATGAAGCAGTTACACAGCTGAATGACATCGAAGATAATCTAGTGGACGAACATAAGAGCAGTATCGAGGAAACAAGAACGCTGTTAGCTGAAGAAGAGAAACTTGTAGAAAGAATAGACTCCGATGTAGATTATGATGTAGAAGAATATGTAAAACGACTGGACGAAATTCTAGCTCATAAGATCCAGAAGTTCTCCGAATTACGAGGTACGCGAAGGTTTAGTTTAAatgatgttgatgacgatgatgatgatgaagtagatgatggtgatggtgatgatgataacaatttgatagtgttggtgatggttattgatggtgatgataatgattgtgatgacatcatgacatcatga

Transcript

alvinactis_v1_g21580

Protein

Uniprot

Uniprot term	Description
P28740	Kinesin-like protein KIF2A OS=Mus musculus OX=10090 GN=Kif2a PE=1 SV=2
O00139	Kinesin-like protein KIF2A OS=Homo sapiens OX=9606 GN=KIF2A PE=1 SV=3
Q5ZKV8	Kinesin-like protein KIF2A OS=Gallus gallus OX=9031 GN=KIF2A PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47971	KINESIN-RELATED PROTEIN 6	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10393	KIF2_24, MCAK; kinesin family member 2/24	-	Cytoskeleton proteins	ko04812	deepkoala