Detailed information of alvinactis_v1_g21201 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_11:4936421...4949128
NR annotation: XP_020906211.1, UV excision repair protein RAD23 homolog A [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P54728UV excision repair protein RAD23 homolog B OS=Mus musculus OX=10090 GN=Rad23b PE=1 SV=2
Q4KMA2UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1
P54727UV excision repair protein RAD23 homolog B OS=Homo sapiens OX=9606 GN=RAD23B PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyUBD|Alpha-Helix|UBA
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF00627UBAUBA/TS-N domainDomainInterproscan
PF09280XPC-bindingXPC-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041811DomainRAD23A/RAD23B, UBA1 domainInterproscan
IPR015940DomainUbiquitin-associated domainInterproscan
IPR036353Homologous_superfamilyXPC-binding domain superfamilyInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR004806FamilyUV excision repair protein Rad23Interproscan
IPR006636DomainHeat shock chaperonin-bindingInterproscan
IPR015360DomainXPC-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10621UV EXCISION REPAIR PROTEIN RAD23Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0031593Molecular Functionpolyubiquitin modification-dependent protein bindingInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0070628Molecular Functionproteasome bindingInterproscan

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