Gene detail

Detailed information of alvinactis_v1_g20901 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g20901	PHOSPHORYLASE B KINASE REGULATORY SUBUNIT	chr_10	25262427	25307018	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g20901

ATGATGACCCTTATGCGGGTAGGTACTGTACCAAAAAGAAATCCTTCCGGAAGTCAGAAAAACTCCATGGGGGAGAGGGACCCTGTTACTGGTCTCCTTCCACCACGTATAAAATGGAATAGTGAGGATCACCATTCTAGTGAATTTCCTAAACATGCATGGGTACGTGACAACGTCTACAGCATTCTTGCAGTGTGGGCCCTTGCATTGGCATATCGCAAGAATGCTGACATGGATGAAGATCGTGCTAAGGCCTATGAGCTAACACAGGCTGTAGTTAAGCTTATGAGGGGGTTGCTGTCATCCATGATGCGACAAGCTGATAAAGTAGAAAGCTTCAAGACAAGTCAATCCAGAGCAGATTCTCTTCATGCCAAATATGAAATGtCAACTGGTAGTACATGTGTTAGTGATCATGCTTGGGGTCATCTTCAAATTGATGCCACATCTTTGTATCTTCTAATGCTGGCACAGATGACTGCTTCAGGTATTCAACTTGTTTTCACAGTGGATGAAGTAGCATTCATACAGAACCTTGTCTTTTACATTGAAAAAAGCTATTCTATACCAGATTATGGTATCTGGGAAAGAGGTGACAAACTAAATCATGGATTGCCAGAGTTGAATGCAAGCTCCATTGGACTTGCAAAGGCTGCATTGGAGTCTTTGAATGGTTTAGATCTCTTTGGCCCAGAAGGAAGTCAATCATCAGTTATTCATGTTTTGCCAGACGACATACAGAAATGCAAGGCCATTCTACAATCTATGTTACCAAGAGAATCAAATTCAAAGGAAATAGCAGCATCATTGTTAAGTGTTATCAGCTTTCCTGCTTTTGCAGTAGAAGATAAAGACATTGTTGACTTAACAAGAGATGAAATTATTGATAAACTTCAGGGTAAATATGGTTTGTGCCGCTTTCTTAGAGATGGCTATAAAACACCTGTTGAAGATCCATATCGATTGCATTATGAGCCTGCAGAGCTTGAAATATTCCAGCACCTTGAATGTGAATGGCCATTGTTTTATTGTTACCTTATCTTGGATGGACTTTATTTAGATCGCCCCGAACAGGCCAAGAAATACAGGAATTTACTGGATGAATTGTTAATAAGAGACAAAACTGGACTTATTCTTGTACCAGAACTCTTCTATGTCCCTAAAGATAAGGTTGCAGAAGAAAAATCTAATCCTCACAGTGTTGAGAGAACAAGAGGGGAGTTTGCACCTCATATGTGGTCTCAGTCTCTCTATATAGTAGCATGTTTGTTGCAAGAGAAGTTTATTGCTATTGGTGAGCTAGATCCACTCAACAGAAGGCATTCAACTGAGAATCGCCCAGATGTGGTTGTACAAGTTGCCCTGTTAGCAGAAGATGAAGTTGTGTCACAACTACTTTCTGGATTGAATGCACCTGTTCAGCTAATGAGCCATGTGCAGCCTATTCAAGTACTTCCTGCACATGTCCTGGCAATGACATACCAACAGTTAGGAAAATGTGCCCATCTCAATATGACAGGAAGACCAATTTACAACATTGGTGCACTTGCATCAAGTACTCTATATAGAATGGGTACTGGACTGTTTGCATTCACTCCACAGTTCCTGGATTACCACCAGTTCTATCTGTGTCTGGACAATGAGTTCCTGGCAGACAGACTCAAGTCTCTTGTTGGATACCTTGGAGCAAACTGGAGACTTCTTGGAAGACCAACTTTGACATTGATTATAACAAACTCAATGATGGAGGACTCACAGACTTCCTGCATTGCTAAGCTAATAATGAAGCTTAAAGGAGGATACATCTCTGGAGTAAGGGTGCGTTTGGGATACCTGTCAGATTTTCTCAGTACGTCATGCATCACAACACTTCACTTTGCTCGAGATTACGAAGAGAGAGATATTAGAAGTTTGCAAAGGAAGTCTTCATTATCAAAGGATTATCTGAGAAGATCTGAATCAATATGTAAAGACAGAACTCGTTCCTTTACTACCTCCACACCAGAAGGAGGAAAGGCTTTTGGAGCTATCAAGAGAAGCAGAAGCATCTCTATTTATTGTGACAAAGACAATTTGGTCATGGGTACACCATGTCAAGGTTTTTTATTGTATATGGAGCTCTTTAGTATGCTATTTGAATTGGCAACAGGGGCTCATTTGTACAGCTGGTCTACTCAAGTAATGCTCCTGATACAGAGGTCTCACCAGAATGTTGGTTTTAGTAtactactactactactactaccactaccactaccactaccactaccactaccactaccactaccactaccactaccactaccactaccactaccactaccactaccactaccactaccactaccactaccactaccactaccactaccactaccactaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccgccaccaccacaaccactaccaccaccaccaccaccaccaccaccaccaccaccaccactacacccaccaccactacaccacccaccaccaccaccaccaccaccaccaccaccaccactaccactaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccactaccactactaccactactaccactaccactaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccactaccactactactaccactaccactactactaccactaccactaccaccaccaccaccaccaccaccaccaccactactactaccactactactaccactaccactactactaccactaccactactaccaccaccactaccaccaccaccaccaccactaccactaccactactactactactactactactcactactactactaccaccaccactaccaccaccaccactaccaccaccaccactaccactaccactactactactactaccactactactactaataataatactactaATGGTTTAATTACATTTGAAGAAAGGAGAGAAGAAAAAATGGGGTCACCCAATGGGTCACCAGTTGTCACTGTTGGTTTGGGTGCAGACTTTGATACTAATCTGTTTGGTGTCCCAGGAACTACTGTCAAAAAACTTTTGGAAGAACTGTATGAAAAGTGCTGTACAGATTTGCTAGTCAATCAGAAGCAAATAACAATAGGCATCCCTCAAGATGGCCAAGAAGAAGTCATTACAAGGCCTCTGCCTTCAAGCGAGCTAAAGAAGATCATTTATCAAGTGTTTGGAGAAGACATGAGCACAGGAGTATTGACGCAGGAATTGTTGGTATACCTCGGTATCTTTGTTAAATCTGATCCAAAGTTATTCACTGAAATGCTGAGATTAAGGATTGGACTTATCATTGAAGTAATGGTAGCTGAGTTGGCTCGATCTCTCGACTGTTTAGGTGAGGATGCTGCCGAATACTTCATGAACCTCAGTCCTTTTGAGATGAAGACCTTGTTGTATCATATCTTGAGTGGAAAAGACTTTGGAATCACTGATGGGTCGATACACAACATATCAGAGAAACAGCTGTCTATCATCAATATTGATCTCCATAAGAGAGTCGGCATGAAGAAACTCTCAAAGGCCATCAAGAAATTGAGCACTATCTCACAACTAACTCGGAAGATAGGTGTTGTCTCACAACCGTCACATCTAGAACTGAGTCTGAGTGACCGTCGGGTGATGACTCGACAGGTGGCGAACCCTGACCTTCATATTACTAAGCAGGAAAGCGTCGATGACGCTAAAGAGCATGATGAGCAGAAGCAAGCTGACGAACACCATGAAGATGAACAAGTAGGGAACTGGGTTCGAAGGCGATGCCTCGATGGAGCGCTAAACAGAGTCCCCGAAGACTTCTATCGTAACGTATGGAGTGTTCTTGAAAAGTGCCACTGGATCACCATATACAAATACGCTCTTCCCTCAGCAATGGTTCGCGAAATGACTGCCAGAGAACTAAAGTTTGCGTTGTGTGTAGAAGGAGCCTTAAATCGTATACCAGAGCCAGAATATCGACAACTAATCGTAGAGGCGCTCATGGTGATGGCCTTGGTAGTGGAAAGCTATCCTGACCAACCCTTATGGGATACAGTCGACGTAGATGACTTAGTCCATGAAGGATATCAGATTTATTTGAAGGAACAGGTTGCCATAGGCGGTGATTCGACAGTTTGTTGTGCGCGCCCGGTACATGAGCGGATTAGCTGTGGAGGTGCTGGTGGAATATGTCGTTACTTCTACGATACAGCACCCAGTGGTCGATACGGTACGATGACCTACTTCTCCAAGGCCGTAGCCAAGAGATTGAGCCATCTTCCCCATGACAATGAATGTGTATTATCTTGA

Transcript

alvinactis_v1_g20901

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00723	Glyco_hydro_15	Glycosyl hydrolases family 15	Repeat	Interproscan
PF19292	KPBB_C	Phosphorylase b kinase C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008734	Family	Phosphorylase kinase alpha/beta subunit	Interproscan
IPR008928	Homologous_superfamily	Six-hairpin glycosidase superfamily	Interproscan
IPR011613	Domain	GH15-like domain	Interproscan
IPR012341	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR045583	Domain	Phosphorylase b kinase regulatory subunit alpha/beta, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10749	PHOSPHORYLASE B KINASE REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005516	Molecular Function	calmodulin binding	Interproscan
GO:0005964	Cellular Component	phosphorylase kinase complex	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0005977	Biological Process	glycogen metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-