Gene detail

Detailed information of alvinactis_v1_g20874 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g20874	CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED	chr_10	24665228	24708922	+

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g20874

ATGGCCGGCGCTTGGAGGTCAAATTTGGGCAGATTTGCCAAGGAAATTCGTATTCATCTCTGCCAAACTTCTGAAAATAGTCAAGGTGTAAGAAAATTCCTGGAAAAGAATTACACAGATATCAAAAAAGCAAATCCAAAGTTCCCCATTCTTGTCCGAGAATGCAGTGGCATATTCCCCAAGATGCATGCACGATATGGTTATGGTAAAGAAGTTAGTATAGAACTGACAAATATGAAAAGTGAAGATGTCAGTAGAGCCATGGAAAAACTTAGTTCTGAGGGAACCAACATCAAGGTTGCAGTTCGCTGCAGACCTTTCAGTGAAAATGAAAAAGCTAAAACATCCACAAGGGTTGTTAAGATGAGTGGAGAGAAGATCATTGTTCATAATCCTCTACCTGGTTCAGCTACTAAGGAGCATTCATTCACCTTTGATCACAGCTATTTCTGGGAAATTAAAACTGAACAACTTTACCATGATCTTGGAGCTCCTCTTCTTACAAATGCATTAAATGGTTACAATGTTACTTTGCTAGCATATGGCCAGAAAGGTACTGGGAAAACGTTCAGCATGAAAGGTTCTGAAGAAGAACCAGGAATTATTCCTTTGCTCAACCAAGACCTTTTCAAGCACATTGATGAAGCTCCACCAAATAAGCAATTCTTTGTCACagtgtcatactatgagATTTACCAAGAATCCATCAATGATTTGCTAAACCCAAGTGGTTATGAACTTAGAGTAAGACAGCATCCTCAGCTTGGCATTTATGTTGAAGGCCTAGCTGAACTTGTTGTCCAAAATGCAGAGGATATTGCAAGATTATATGAACAAGGAAACAGAGTTAAAAAGTTAGCTTCAGCTGACAAAAGCCCTAATGCATCAAGATCAAGCAGCGTGTTCACTATCAGTGTTGAGCAAAGACACACAGACAAAGGTTCCTCTGGAACAGGCATCAGGTCCAAGATAATACTTGCAGACATGGcagGTTCAGAACGATCTGACAATACAGAGATAACTGTTAAACAGGGTGCTGTGTTCTTTAACAAAGGAGTTAATGCATTTAATGCAGTTGTCAGTAGTCTGGCTGTATCCAATAGGAAAGAAGGCCATGTCCCTTACAGAGATTCTAAAATCACTAGAATTTTACAGGATTCTGTTGGTGGAACTGCACATACAACTATGCTGTTAACACTGTCACCAGCAGACTCTGATTTTGAAGACACATTGACCAGTCTTCAGTGTGGCAGTAAAATGAAAAACATCAAAAACATGATCAAGACAAATGAGATTGAAAATATCAAAATCATCAAAGATCTGAGAGAAGAAATTACAAGACTTAGAGAAAAGTTGTCAAGAACTGGAATCACTAGTGGTCCAAATAAAGATGATGTTACTCAAATGGAGGAGCTTATCAAAGACTTACAGACAGCTAAAAGACAAACTTGGGAAGAGAAAGAAAGACTGTCAGAAAACTATGACGAAGAAAGAAGATTGAATTTGGCTAATAAGggaatacttgactgggtaatggacaCCATGAAAAGAGATAATAAAGAAGTTCAAGAGAGATTGATGGTGCTTCAGAAAGAGAAAGACCAATTGACTACAGAGTTCAAAGAGAAACGCAAACTAGTGGATGAATTGAAAGATGACCTTCAAACTAAAATCACAGAATATTCCAAACTCACCGAATCTGGCAAGGGAAGCGAGGAGGGATTGAAGTCAATGGTTTCAACTATACACAACATCAAAGAGAAACTCAAAGGTGAAAACGACGAACTGAAGAAGATCAAACATAAACTCAAAGAAATCCAAGAAAAACAAAAGTCAGAGAAAGAGGAAGCAAAAACACAGACTTCATTCATGAAAGGCAATTCCGAACTGCGTCACAAAGTTGAGACTGAACAACGTGAAAGAGTTGAAAAGGAAAATGCTCAAACTCTTGCTGATGAAGTGGATCGAATTCAAATGGAAATTGAACAAGAGAAAGCTGAACTAAAGCTCAAAGCTGCTGAGGGAGCGCAGTATACCGCTGACCAAGCAATTAAATTGGAGATGGACTTAGTGGAACTGAAGGCTGAGAGGTCCATCATGTCTATGaagATATCTGCCCTGGAAAACGAGAAAAAGAAGCTTAAATCAGACTTAGAAGAAGCTTATAAAACCCATAAAGAAGAAGTGGAAATTCAACAATTACAGCACTTTCAGACTTTTCGAAATTACCGCGAAGTATTTGAAGAACAGAAAGCAGGCATCGAACAGCGTTATCGTAGCCTGTTAGAAGAGGCTATACAAGACGCAGTATTCCTGTCTACACGCAACCAAGAACTCATGCAAGAGAGCCAGTCCCTACAGCAAGAAATAGCCGAGATGAAAGATCAGATGTCGTTGAGAGGAAACATAGAAGACTAA

Transcript

alvinactis_v1_g20874

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan
PF05047	L51_S25_CI-B8	Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR007741	Domain	Ribosomal protein/NADH dehydrogenase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR036249	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47969	CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005875	Cellular Component	microtubule associated complex	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0007052	Biological Process	mitotic spindle organization	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0051231	Biological Process	spindle elongation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-