Detailed information of alvinactis_v1_g20864 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_10:24455510...24473234
NR annotation: XP_031573869.1, exosome complex exonuclease RRP44-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9CSH3Exosome complex exonuclease RRP44 OS=Mus musculus OX=10090 GN=Dis3 PE=1 SV=4
Q9Y2L1Exosome complex exonuclease RRP44 OS=Homo sapiens OX=9606 GN=DIS3 PE=1 SV=2
Q9SHL7Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana OX=3702 GN=RRP44A PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17215Rrp44_S1S1 domainDomainInterproscan
PF00773RNBRNB domainDomainInterproscan
PF17849OB_Dis3Dis3-like cold-shock domain 2 (CSD2)DomainInterproscan
PF17216Rrp44_CSD1Rrp44-like cold shock domainDomainInterproscan
PF13638PIN_4PIN domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR033770DomainExosome complex exonuclease RRP44, S1 domainInterproscan
IPR001900DomainRibonuclease II/RInterproscan
IPR029060Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR002716DomainPIN domainInterproscan
IPR041505DomainDis3-like cold-shock domain 2Interproscan
IPR033771DomainRrp44-like cold shock domainInterproscan
IPR022966Conserved_siteRibonuclease II/R, conserved siteInterproscan
IPR002466DomainAdenosine deaminase/editaseInterproscan
IPR050180FamilyRNR RibonucleaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23355RIBONUCLEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0004000Molecular Functionadenosine deaminase activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000176Cellular Componentnuclear exosome (RNase complex)Interproscan
GO:0000177Cellular Componentcytoplasmic exosome (RNase complex)Interproscan
GO:0004519Molecular Functionendonuclease activityInterproscan
GO:0016075Biological ProcessrRNA catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12585DIS3, RRP44; exosome complex exonuclease DIS3/RRP44EC:3.1.13.-
Messenger RNA biogenesisko03019deepkoala

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