Detailed information of alvinactis_v1_g20461 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_10:18893219...18936954
NR annotation: XP_031555609.1, pre-rRNA-processing protein TSR1 homolog [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2NL82Pre-rRNA-processing protein TSR1 homolog OS=Homo sapiens OX=9606 GN=TSR1 PE=1 SV=1
Q5SWD9Pre-rRNA-processing protein TSR1 homolog OS=Mus musculus OX=10090 GN=Tsr1 PE=1 SV=1
Q5R434Pre-rRNA-processing protein TSR1 homolog OS=Pongo abelii OX=9601 GN=TSR1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04950RIBIOP_C40S ribosome biogenesis protein Tsr1 and BMS1 C-terminalFamilyInterproscan
PF08142AARP2CNAARP2CN (NUC121) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007034DomainRibosome biogenesis protein BMS1/TSR1, C-terminalInterproscan
IPR030387DomainBms1/Tsr1-type G domainInterproscan
IPR012948DomainAARP2CNInterproscan
IPR039761FamilyRibosome biogenesis protein Bms1/Tsr1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12858RIBOSOME BIOGENESIS PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000479Biological Processendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0030688Cellular Componentpreribosome, small subunit precursorInterproscan
GO:0034511Molecular FunctionU3 snoRNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14799TSR1; pre-rRNA-processing protein TSR1-Ribosome biogenesisko03009deepkoala

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