| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g20162 | RNA-SPLICING LIGASE RTCB | chr_10 | 14523014 | 14527466 | - |
| CDS | |||||
| alvinactis_v1_g20162 | |||||
| Transcript |
| alvinactis_v1_g20162 |
| Protein |
| alvinactis_v1_g20162 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01139 | RtcB | tRNA-splicing ligase RtcB | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001233 | Family | RNA-splicing ligase, RtcB | Interproscan |
| IPR036025 | Homologous_superfamily | tRNA-splicing ligase RtcB-like superfamily | Interproscan |
| IPR052915 | Family | RNA-splicing ligase RtcB-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43749 | RNA-SPLICING LIGASE RTCB | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003909 | Molecular Function | DNA ligase activity | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0008452 | Molecular Function | RNA ligase activity | Interproscan |
| GO:0030145 | Molecular Function | manganese ion binding | Interproscan |
| GO:0042245 | Biological Process | RNA repair | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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