Detailed information of alvinactis_v1_g2015 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_1:34228456...34344308
NR annotation: XP_020905445.1, tetratricopeptide repeat protein 21B [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7Z4L5Tetratricopeptide repeat protein 21B OS=Homo sapiens OX=9606 GN=TTC21B PE=1 SV=2
Q0HA38Tetratricopeptide repeat protein 21B OS=Mus musculus OX=10090 GN=Ttc21b PE=1 SV=1
Q6INC1Tetratricopeptide repeat protein 21B OS=Xenopus laevis OX=8355 GN=ttc21b PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF13432TPR_16Tetratricopeptide repeatRepeatInterproscan
PF14559TPR_19Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040364FamilyTetratricopeptide repeat protein 21A/21BInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14699STI2 PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030991Cellular Componentintraciliary transport particle AInterproscan
GO:0035721Biological Processintraciliary retrograde transportInterproscan
GO:0061512Biological Processprotein localization to ciliumInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19673TTC21B, IFT139B; tetratricopeptide repeat protein 21B-Cilium and associated proteinsko03037deepkoala

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