| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g19968 | TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) | chr_10 | 11399368 | 11419388 | + |
| CDS | |||||
| alvinactis_v1_g19968 | |||||
| Transcript |
| alvinactis_v1_g19968 |
| Protein |
| alvinactis_v1_g19968 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00589 | Phage_integrase | Phage integrase family | Family | Interproscan |
| PF00931 | NB-ARC | NB-ARC domain | Domain | Interproscan |
| PF04852 | ALOG_dom | ALOG domain | Domain | Interproscan |
| PF13374 | TPR_10 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13424 | TPR_12 | Tetratricopeptide repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002104 | Domain | Integrase, catalytic domain | Interproscan |
| IPR002182 | Domain | NB-ARC | Interproscan |
| IPR003593 | Domain | AAA+ ATPase domain | Interproscan |
| IPR006936 | Domain | ALOG domain | Interproscan |
| IPR011010 | Homologous_superfamily | DNA breaking-rejoining enzyme, catalytic core | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR013762 | Homologous_superfamily | Integrase-like, catalytic domain superfamily | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR051787 | Family | Effector and Ciliary Development-Associated Protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45641 | TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006310 | Biological Process | DNA recombination | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0043531 | Molecular Function | ADP binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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