Gene detail

Detailed information of alvinactis_v1_g19575 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_10:5736045...5810103
NR annotation: XP_031559877.1, C-Jun-amino-terminal kinase-interacting protein 4-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g19575

ATGAGCGACATGGAGACCGACGATGACAAGAAAGATGAGGTGTACTCGAGCGGTGAGGAAGGGGCTCAAACTGTCATGTCCGAACGGGTATCAAATTTGGCCAACAGTATTTACAGCGAATTTGAGCGAATGATACAGAAATACGACCAAGATGTAGTCTCTGGGCTCATGCCATTGATGGTGTCCGTGTTAGAACAGCTAGACAGTGCTTATGGGGACAATAATGAACAACTTGTCGAGCTGGAGATGCTCAGCGACGACAACGAACAACTCATAACTCAGTACGAGAGGGAAAAACAGCTGAGAAAGCTGGCCGAAAAGCGATACCTTGAAATTGAGGATCAAGTTGAAGCAGATACGAGAAGCACCGAAAATAATATTGAAGTTCTGACGCATGATAACAAGGATCTTGAAAACAGAGTCAAGAGCTATCAAGATCATGTTGAAAGACTTGAAGAGAGGATATCAGAAATGAAACGCCAATATGATAGTCTACATAACAGGCACAAGGAGGTTGTTCATCATTACATGGAAAGAATTGAGAAAGCTGAGAGGCGATCAGTGTCAGGTGAAACACCACAAAAATCATCCCTCAGACCTAGGACGGCATCATCTGGTAACTCTGCCAAATCACCTATGGGTGCTGTACCTGGTTCCATTCATGAGCTAGCAATGGAAGAACAGGCTAGCCCAGGTGTCAATGTCCACATGCCGAAGAGTCCTGAAATTGAGCTGTCATCATCATTTGAAAAATCAGGAGCAAACGATTTGTCCCTCAGAGATGAATCTCTTGCTGATAGCTTTAAAAATTCAAGTGTGCTGTCAACCTCGGCTTCAAATGGACTGTCTGGAAGCCCAGGAACAAAACCCAGAAGTGACAGTGCCGATATTAATAGCAGCACCTGCAGTATTAGTGATGTTGATAACTTACCCATTATGAATGCCAAGGATGTTGCAAGTATGCTGACTCCAAACTCTAGTGTGACGAGGCTGAGTAAAGATGCACTGGACATTGTACAATCAACACCTGAATTAATGGATACTAGCAATGCTGTTAGGCGTGAGAGGAGTGAGAGTGGATCTCAACGTCCTATCTCATTGGACTTGGAGAACCTGCCCGAGGGAGTAGCCGCTAGTTCCTTGTTTGCAGAGTTGACTAGTGAAGAACCAGACATGATTGGTGAGATGGACACTGGAGCTGATATCACTGCTATGGGGAAGGAACTGGAGAGTACTATGACAGAAAATAAGGACCTTGTTGCTGCGAAGAACAAACTTTCAACACAGAAGAATGACTTACTGAAGAGAGTAGAGGAGCTATCCAATGAAAAAGAAGTATTGAGAGAGGAGCTTGATACAATGAAAGAAACAAGACAAAACTTGAACTCAAGATTAACTGATAGTGAACATAAGTTAAAGAGAACCAAACACGAAGCAGAAAAAGCAACAGTTGCATTGAAAGAGGCAAGTGTCTCTGCAGCTCACAGGAAGCGCTTCACTAGGGTAGAGATGGCAAGGGTGCTAATGGAAAGAAATCAGTACAAGGAAAGGTTAATGGAACTACAAGAAGCTGTCAGATGGACTGAAATGATAAGGGCATCCAAGGAGAGAAATTATGAGCTGCAACAGAAGAGAAAGTCATCGATCTGGAAATTTTTCAGTAACCTGTTTGGTCCCTCGCCAAGGAGACCCAATCCTTCTGCTGTTAGCATTCGATACAACTCACCAGGAGAAACAACACCCCCAACACAGCGTCGTCATTCACTCAACACTGGTTCTGGTTCAACTGTGTCTGGTGGTTTTGGCAGCGAAAACTTTGACAGGCAGCGAGTAAATGAAAGAAGGGAAAGATACAAACAAGTGCGAGCTTATCTAAATACAGATCTCTCTGAGGGACGGATGCAGGCATATGGGTGGAGCTTACCTGCCAAATACTCTGCTGAAGTAGTTGAAGGTGGAAAGAGTCTGGTATCTGTACCTGTACCAGTGTACTGTAGACCATTAAATCTTAGTGATCCTGGCATGAAGATCTGGTGTGCAGCAGGAGTAGACCTATCAGGGGGGGTTACCCTAGACGGTGGTGCTGCAGTAGGAGCCAGTGTCTTCTATGCAAATACTCCATCTAAAGATGGTGATGAATTAGAGGTCAAGGAGTCTACACCATCTATGACGTGGATTGGTAGTAGCACTCATTCCTGTAGTAAAGTGACTATCATTGATGCTAACTACCCTCAGAACATCCTGGACTGTTTTGTGGTCTGTACATCTCATTTACTGTGTGTTACTGCagtacctggtgctagacttggtgattatgatatccattgctcaactgatactagtatatatactgttgATTCTCGTGGAAGCCAGTCGACTATTGATGCAAGTAAGGAGTCCATCATTTCTGTTACAAGTACAGACTTCTCCGATCCCCTTGGTGCTAAAGTATCAGCGAAAGGACATGTTGATGATGGTGATGACACCAGTAGTCAAGTATCAGATGCACCCACCATCACAGATGTCTCGGCTGGTGAGGACCGACTTGAACCTAAACTTGATGAAAATGGAGTAGCAAGGATGAGTAGCATTCTGTCTACAATGTGGCTTGGTGCACAGTCTGGATGTGTGTATGTCCATTCTGCTATTTCTAACTGGCGAACTTGTATCCACTCTATAAAGCTCAAGGACTCTGTTCTCAGCATTGTTCACGTCAAAGGTCGTGTTTTGGTAGCATTAGCTGATGGAACAGTAGCGATATTTCATAGGGCATCAGATGGTCAATGGAACTTTAATAACTACCATCTACTTGACCTTGGACGTCCTCACCATTCTATACGTTGTATGACTATGGTACATGATAGGGTGTGGTGTGGATACAGGAACAAGATACAAGTGATACATCCCAGGACTATGAGAGTAGagAAAACGTTTGATGCTCATCCTCGTCGCGAGAGTCAAGTACGACAGTTAGCATGGATTGGTGATGGTGTCTGGGTGTCCATCAGACTGGACAGTACATTACGATTGTATAATGCCCATACCTTCCATCATCTGCAAGACATTGATATTGAACCCTACGTTAGTAAGATGTTGGGTACTGGTAAACTTGGTTTTTCGTTTGTGCGTATAACGTCTTTACTACTTACTAATGACCGACTATGGGTGGGGACGGGCAATGGAGTCATCCTGTCTGTCCCTCTCGTAGCAGCACGACCAGCTAGGGATGATAGTGATCAATCTCATGTTACAAGCAGCCCTGGTACGGGTGGTCCTGGTGGTGCTGTCAGGGTGTACAGCAACGAGGGCAAAGACGGGGAAACTGCACCATCAGGAACTGGAAGCTTTATGCCATACTGTTCAATGGTCAATGCCCAACTATCATTTCATGGCCATCGAGATTCAGTGAAGTTCTTCGTTGCAGTACTAGGCTCCATGAAACGTGCATCATCAAGTTCTTCCGTTAGTACCCAGACCCAAACAGGAAGTAAGCCTGCAAGCCCCGCGCAGTCCCAGACTCCAAGTCCAGAGAAGAGATTCCAGGAAATGATGTTGGTTTTGAGCGGAGGGGAAGGTTACGTGGACTTCCGGTTGGGTGATGGAGAGGAAGCAGCGATGGAAGACCAGGCAGGAGATTTGATATCAGTGACCATTAAAGGACAGTCGACCAATGAACGTAGTCATATCATGGTTTGGCAGGTTGCATAA

Transcript

alvinactis_v1_g19575

Protein

Uniprot

Uniprot term	Description
Q58A65	C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=2
O60271	C-Jun-amino-terminal kinase-interacting protein 4 OS=Homo sapiens OX=9606 GN=SPAG9 PE=1 SV=4
Q9UPT6	C-Jun-amino-terminal kinase-interacting protein 3 OS=Homo sapiens OX=9606 GN=MAPK8IP3 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19056	WD40_2	WD40 repeated domain	Repeat	Interproscan
PF16471	JIP_LZII	JNK-interacting protein leucine zipper II	Coiled-coil	Interproscan
PF09744	Jnk-SapK_ap_N	JNK_SAPK-associated protein-1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR034744	Domain	RH2 domain	Interproscan
IPR039911	Family	JNK-interacting protein 3/4	Interproscan
IPR034743	Domain	RH1 domain	Interproscan
IPR032486	Domain	JNK-interacting protein, leucine zipper II	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR019143	Domain	JNK/Rab-associated protein-1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13886	JNK/SAPK-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005078	Molecular Function	MAP-kinase scaffold activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0019894	Molecular Function	kinesin binding	Interproscan
GO:0030159	Molecular Function	signaling receptor complex adaptor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20317	SPAG9, JIP4; c-Jun-amino-terminal kinase-interacting protein 4	-	Membrane trafficking	ko04131	deepkoala