Detailed information of alvinactis_v1_g19052 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_9:25468897...25480077
NR annotation: XP_031557599.1, U1 small nuclear ribonucleoprotein 70 kDa-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P08621U1 small nuclear ribonucleoprotein 70 kDa OS=Homo sapiens OX=9606 GN=SNRNP70 PE=1 SV=2
Q1RMR2U1 small nuclear ribonucleoprotein 70 kDa OS=Bos taurus OX=9913 GN=SNRNP70 PE=2 SV=1
Q66II8U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus tropicalis OX=8364 GN=snrnp70 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12220U1snRNP70_NU1 small nuclear ribonucleoprotein of 70kDa MW N terminalFamilyInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR051183FamilyU1 snRNP 70 kDa and U11/U12 snRNP 35 kDaInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR022023DomainU1 small nuclear ribonucleoprotein of 70kDa N-terminalInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13952U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005685Cellular ComponentU1 snRNPInterproscan
GO:0017069Molecular FunctionsnRNA bindingInterproscan
GO:0030619Molecular FunctionU1 snRNA bindingInterproscan
GO:0071004Cellular ComponentU2-type prespliceosomeInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11093SNRP70; U1 small nuclear ribonucleoprotein 70kDa-Spliceosomeko03041deepkoala

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