| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g18998 | APOPTOTIC PROTEASE-ACTIVATING FACTOR 1 | chr_9 | 24521485 | 24540629 | + |
| CDS | |||||
| alvinactis_v1_g18998 | |||||
| Transcript |
| alvinactis_v1_g18998 |
| Protein |
| alvinactis_v1_g18998 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF00619 | CARD | Caspase recruitment domain | Domain | Interproscan |
| PF00931 | NB-ARC | NB-ARC domain | Domain | Interproscan |
| PF17908 | APAF1_C | APAF-1 helical domain | Domain | Interproscan |
| PF21296 | APAF-1-like_WHD | Apoptotic protease-activating factor 1-like, winged-helix domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001315 | Domain | CARD domain | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR002182 | Domain | NB-ARC | Interproscan |
| IPR011029 | Homologous_superfamily | Death-like domain superfamily | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR020472 | Repeat | G-protein beta WD-40 repeat | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR041452 | Domain | APAF-1 helical domain | Interproscan |
| IPR042197 | Homologous_superfamily | Apoptotic protease-activating factors, helical domain | Interproscan |
| IPR048975 | Domain | Apoptotic protease-activating factor 1, winged-helix domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22845 | APOPTOTIC PROTEASE-ACTIVATING FACTOR 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0042981 | Biological Process | regulation of apoptotic process | Interproscan |
| GO:0043531 | Molecular Function | ADP binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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