Gene detail

Detailed information of alvinactis_v1_g18886 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_9:22856366...22863852
NR annotation: CAH3146574.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g18886

ATGGCAGACGTCATTGCAGATGATAAGCCACGAGGCGTCCACGCCCAGCAGTTGCTAGCCAAGGTGCGTGATATGTGGGACGAGTGGGATTTGAGAGATGGAGTAAAAGATGACATGTTGGAGTTTGATGCTTTCTACAATGGCTTCCTCGCGCCGTACTTTGGATGCTACAGATGTGACGAAACGAAGCAAGCCCTGGCCGCATTGGATATGGATGCCAATGGCGTTGTGGATTGGAATGAGTTCGCTGTGTATCTCAAGTGGGCTTTACGTCAATATCCTGAGATGAAAGATGCTGAAGAGCTTCTGTCTACAGCCTTCCGCAAGGGTTTGATTCCAGCCATgcaggacgagGCATTACTTGTCACCATCTTTGTTCCTGGCATAGCTGTCAATGTTATGAAGCGGAGGCGTTGCAAGTGCCCATGTGCGTATTATGCAAATACTACCGCCAGATTCCATGCATTGTTGGAAGGTGATTTGGTTTTCAAACTGAATCCTGGTCCAACTAACAGACAAATTGACTCCATTGTTACATCACATTGCAGACCACAAAGGATGTTTTCTACCTGTGCACGTAATTCGTCAAACCTTGTCAACATACGCTGTGAGCCTTGCACTGTGGATGTTAATTATCCTCTGTCTTTATGCTTGATGAACACTCAGTCCATTAGAAACAAAACAGCGGATTTTGTAGATTATGTTTCTGGAAATACATTTGACCTAGTTGCAGTTACAGAGACCTGGCTAAAACCAATCGATGACTCTATCAGAGCCCAGCTATGCCCCGCTGGCTACAGGTTTTTGGATAAACCTCGTGAAGGTTATCGCGGTGGGGGGACTGCACTTCTTTACAAAGATTCTCTGAAGcaaccactctaCATAAATGGTGTCGATCCTGAGTCTGCGTATGTTGCTTGTGTTTATGCTTATGTCGCTAGTcaaccactctaCATAAATGGTGTCGATCCTGAGTCTGCGTATGTTGCTTGTGTTTATGCTTATGTCGCTAGTtgtaaaCCAGGCTTAACGGTGCTTGTCTTTTCTCACACCTCAGTATTACATAAACAGTGCCCTGAGTCTGTGCCATATGTCTCGACTCCAGGGCGTTTCCACTACACAAGTATAACAACGTTGCTTTCATCTAGTAAGTCACCAACAATGTGCAAATGGACCAAATCGTTCCTCCACTGGTGGCGGAAACCAAGTTCTGGAAACCAAGAGCAGGACGACATTGCAGGGAGAAAGAAGGGCCAAAATAGGACGTCTTTCAAGAAACAAATTAACCGAGTTGAACGAGAGCTGGAAGAGATCGCAGAGGAGAGAAAGAGTCTCAAGACCATGGAGCTGTTCGTGTTGGATAACTCTATCCGTGAAAGCACTGTCGGCCAGCTTCGAGGCCATACGATTGAGAACAAGTGGCAGATCTACAACGAGATTAAGAAGATTGGCTTCCAGCACATCATTGTGGCGTCCTTCTCCCACATGACGCGCCTGGGAGACACCTTCATCCAACAACTGCACGAAAAAGGAGAAGACTTCAACAAATTCTACGCCTTTAGCGAGTTTCTCGAGTCCATTGACAAGAACAGAGTTCCCGACTCCAAGACCATTCCCATTGGCCTGCGAAAGTGTAAAGAACTGGGCATCAAACACGTCATCATTGAATTAGATCTCGTCTATCGTGGAATCGATTACACCGTCTTCACGGATGACATCATGTGCCAAGTGATTTCTGACAGAATGGCCTGGGTGCGTGAAAATCTCTGCAAAGATTCCCACATATTCTTCAACTTGCGCGACCTTCCAGATTGCATGAATAAAAACCCAGAGCGCCTTTTCAAAGTGGTCAATTACCTTTCCTCGTTGCCTCCCAATGAGCGACCATTTGGGTTGATATTCGAGGAAGCAACTGGCAATTCTCTTCCCGAAGAGCTGGGTGTGTGGACATCTGCTATTCGTAAAGAGATGGACGACTGTGGGTTCAAAGATGGCCACTTACTGGTACACGTCCACGAGAAGTGGGGAATGCAAGACTCTACTCAGTTGGAAATGCTTGCCAACGGTGCCAATGGCATCTGGGCGAGTCTCTGCACAGAGGGCGCGTCCATGGGCCATTCCACTTCAACTGTCATGCTGATGAACCTCATTCGCCTTGGGAACAAACGTGTACTTAAGCAGTACAACTGCACAAAGCTTCGAGAAGCTGCACACAATGTCACCATGACAACCACAGGCAAGCCACCTCACCCCAAGCAGGTCATCTACGGCGAGCGAGCTCTGGACATGGTCTATGGAATATCCAACCTTGAGCCCGACAAGAACGATTTGAGCATGGCCGAATTCTTCGGTCAAGAAGCGGTGATGAGAATGTCAACCATGGCTACGCCAGAAATGATTGTCACCAGGCTGACCAGACTGTTTGGAACAAATCCAACGTTCACTGAAGCCAGAGCCAAGAGGATGCTGGAAGTAATGCTGGAGGATCTCCACAAGAACAGAAAAGAAGAATATATGAGTGCAGTAGGCCTCGCCATCTTGTTTGATCGCTCCGGTGGTAAGCTGACTGGAGAGATGGCAGACGTCATTGCAGAGGACAAGCCACGAGGCATCCACGCCCAGCAGTTGCTAGCCGAGGTGCGTGCAATGTGGGACGAGTGGGATTTGAGAGATGGAGTAAAAGATGACATGTTGGAGTTTGATGCTTTCTACAATGGCTTCCTCGCGCCGTACTTTGGATGCTACAGATGTGACGAAACGAAGCAAGCCCTGGCCGCTTTGGATATGGATGCCGATGGCGTTGTGGATTGGAATGAGTTCGCTGTGTATCTCAAGTGGGCTTTACGTCAATATCCTGAGATGAAAGATGCTGAAGAGCTTCTGTCTACAGCCTTCCGCAAGGGTTTAATTCCAGCCATgcaggacgaggttattaaagccgaatctacatga

Transcript

alvinactis_v1_g18886

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13833	EF-hand_8	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46670	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan