| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g18827 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED | chr_9 | 21864495 | 21891382 | + |
| CDS | |||||
| alvinactis_v1_g18827 | |||||
| Transcript |
| alvinactis_v1_g18827 |
| Protein |
| alvinactis_v1_g18827 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00595 | PDZ | PDZ domain | Domain | Interproscan |
| PF17820 | PDZ_6 | PDZ domain | Domain | Interproscan |
| PF21219 | USH1C_N | Harmonin, N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001478 | Domain | PDZ domain | Interproscan |
| IPR030237 | Domain | Harmonin, N-terminal | Interproscan |
| IPR036034 | Homologous_superfamily | PDZ superfamily | Interproscan |
| IPR041489 | Domain | PDZ domain 6 | Interproscan |
| IPR051844 | Family | Sensory Perception USH2 Complex Protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23116 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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