Detailed information of alvinactis_v1_g18827 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_9:21864495...21891382
NR annotation: XP_032220713.2, harmonin-like isoform X2 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y6N9Harmonin OS=Homo sapiens OX=9606 GN=USH1C PE=1 SV=3
Q3MHQ0Harmonin OS=Bos taurus OX=9913 GN=USH1C PE=2 SV=1
Q9ES64Harmonin OS=Mus musculus OX=10090 GN=Ush1c PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan
PF17820PDZ_6PDZ domainDomainInterproscan
PF21219USH1C_NHarmonin, N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478DomainPDZ domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR051844FamilySensory Perception USH2 Complex ProteinInterproscan
IPR041489DomainPDZ domain 6Interproscan
IPR030237DomainHarmonin, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23116PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan

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