Gene detail

Detailed information of alvinactis_v1_g17330 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g17330	UNCHARACTERIZED	chr_8	21490110	21520879	+

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g17330

ATGAATCCAAACTCTATGAGAGCTGTACAAAGTGCCAAAAAGCGACTTGGTGGCTTTGGTAAAGCGATTGCGGAATGTAGGACCGAGGCATCAGTTTATGCAGCCTGTGTAACCAGTAAAGGAAACATCAATCAATATGCCTGCCAACAGCAATTCCAAGCATTTAAGGATTGTATTGAAAAAGCTGATTCCCCTTCAAGCAAGCAAGATGAAAAGACAACGTGTACAATTCTGTGTGGATCAAATGGAGCAAGTGGGAAAAGAAAATCACTGCTTCAACGACCAAGTAGTGATTCCACTATGTTGGGAGAAATGATATTTGGATCAGTAGCTATGACGTACAAAGGATCCACAGTCAAAGTCCATGTAATCAGGTCGCCTCATCAACTGCTGATGACCAAAGTATTCACTCTAAGACCGCGCGCATCTATGTCAAGCTGTTGCAGTGAGAATAGTGAGAGTTTAACATCAAGTCAAGTGGATTCATTGTTAGAATCAAGCAGAATTGAACACGACTCTGCATCTCTGTCATCTCAAAATAACAGTCCAAAAGAGTTTCAAATGAAAGACTGTGTTTCTACACCAGTAGCAGTGCCAGGAATGCTGCCGATAGTTAGAATTGATCCTGAAGATGACAGTGGTTTGACAGCATCGCTAGACAGTCTCTACCTCAATTCTTGTTCTGGTAGCATGACTTCATTGTACAACATTGCCTCATCTCCCCAGTGCGGCAATTTTCAAAGACGACTACATCGAAGTCAGATCAAAAGTATCGATGGCAGGTACTCGAGAAAGCACGAAGATTCATCTGAAGAACCTAATTCACCAATTCTCAGACGCCGACCTAAAATAGGACTTGGGATACTTTTGCCGTTGAGTGCTGATGATGAGAAAAGCAGTGCACTCCAAGGCTTCTTCTTTGCCCATTTTCCACTCTTTGATTCCCATGTACATCGTCTCAGACGTGCAGTAGAGAAAGCTTGTTGTTCAAGGAATTCCTTCTCTGTACAAGTCGTCGAGGCTATTGATAGATTTTCAGAGGATGTATGTAACCTACTCAAGACTCCGAGACTCAAGGAACCTCTCTGGCTCAATATGATGTCCTTTCCTGATCACAGAAGAGACTTGTGTGGACAGTTCATGGAACAATTTACACATTGCTTGGATCTATTCAACAATAGGGAAACTAGTTTCTTTCTGTGTTCTCTGTTGTCTGGTGTACTCACACATCACCTGGCCTGGGTTCCAACAGTAATGCCCGCGATAGCTGCACCGAATAGAGCCTACTTGgacaagcactcttcacaaactTTGGACATTCTTGCTCAGTCTCATCCTTACAACCCTTTGTGGGCACAACTTAGTGATCTGTATGGAGCCATTGGCTTTCCACTGAAGCTTGCAAGAACAGTTATCACTGGGAAAAATTCAAAGCTTGTGGGAGAACTGCTAAGTATTCTAAGTTACTTCATTCGATGTACCGAAGTCTCCGAACACAATCTAGAACGGGTTAAAGTAGAGGAGGAAGCAAATCCAAGCGAAGTCAATTTGGAAACTGTAAACTGTTGTTTGTGTAGCCAAAACGATGGCGTAAATGAACTGGATTTTACTCATAAACATAGCATATGTGAATCGTGTATTGACAAAAGTGGACTTTCTATGTGTGGAAACTGTCAGAAACTAATCCCTAAGGAACTCAATGACATCTCATTGTCAGACAAGTCAAATGAACTGCTGAGAAAGCTACTCCAAGGGCTCCCTTGTTGTCCAAAATGTGGACTTCTGCAGAAGAATTGGAACGTGAATGGACTAATGCGTTTAAATACTATGTCAGGATCCTGTAGCTGCTTGCCGAAGTGGGCAGTTGCCAAGGAACTGCGACATTTTCTGAGTGACGTAACTTTTTCGGAACGCAGTGAGACCTTTAAGTGCTACTGCTGTGAGGCTAATGAACCTTTGAGTGTTGCACAAGATGTTGACGTGAAGTCCACATTTCAATGCTACTGCATCGGGGACGATAAGTGTAGTCATTGCAGCACCACAAAGAATGGATACAGAAATGGCTCACACAAGATGTTTGGTCAAATTCCTGAGCACACTCTAGAAGATATCTTCATGGAGCTTTTATCTCATGATCAGTTTTGCCCCAAACTTGAGTGTGCATGTGATTCCAAAGATGACAGTAGTTGTCTTGAACTAGACCTTGAACCATGTCAAGACAGTGTTGAGAAAGTTGAGAGTGAATCAGGTGATTCCTATGGTAGAAGCGGATCGCTTGATTCAGGATTTCATCAGTCGTCATCTTCGTCATGTTGTGTCAAAGGCAAAAGTGAGTTGGAGAGTTTGAGCGTTGATACATTGGAAGACGGCGACGAGTTTGGACCAGAGGAGCTTCCTTTACTTGGCATTAGTAATAGTTCAGAAGGTGATGATGATGGCAGCCATAAGACTGACAAACAGAAAAAGAGCAACAACTTTGGACGCTCTCTATTCTCAGGTGTTAGTGATAAATATCACTCGGACTTTGTCCTTCAAGGGGTTACTTCCAGCAAGCACGATATTCTACCAAGTCTATCAAACGACTTATGCCTGGCATTAcagCATTCTGTCATAGATGATGCGCTTTCTGATGCTGTTTGTATTTTGGCTGACACAGACAACTGGACTTGTGAGCTGATATCAGCAAAGAAAGGGAGAGTCAAATCATCAAGTGAGTCAACTCAGACACAGCCAGTACAAGTGTCCAACCTGGTGCTGTCCATGTTATCATCAGTTACTGGACTCTGGGATGTCAAAATGCCTGCCGAGTTTTGTCTAATGCACCTTGAAGACAGATTGAAGGGAATTTACCTGAAGAGCAGAGTGATTGCTGAATGGCTGCACACCAGCAAGAAGGCAATCAGTAGATATGAACTGGCAAGAACTTTAGGGATTGATGATAGTGACATCATGCTGCTGCTGGCAGTGGCAAGTTCACATTCTCCACAAGGAATGGCCAACCTGAGCGCCACAAAGGAATATGTCGCTGCAGTATATGAGCATGAAGCGTTCTTCATCCCTTTTATAAACTCCACGAGACAACAAGCCTTGAAAATCATGAACACAAACGTCAAAGTCTATCAAGAACAGGCAAGTAAGGCGAAAACGAAGCGAGCACAAATCATCGTGTTCCCTGAAGATGGCTTGTATGGCTTTGGCTACACCAGAGAATCTATCTATCCATTTCTAGAGACGATACCACAACCATCTTCCCTCGACAAGCCATGGATTCCTTGCCAAGATCCTCACAGGTTCAAAGACACGGACATCCTTCACGAGTTGAGCTGTATTGCATTGCATCTGTCTATGGCTGTTGTAGCAAACATGGGGGACGTACAGCCGTGTACAAAACAGGACCCTAACTGTCCTGCTGACATGAGGTACCAGTACAACACCGACGTGGTATTTGACGTGGATGGCAAGTTGCTGGCCAAGTACCACAAGCAAAACCTATTTCACGAGGAACAGTTTAATACTCCAGTTAAATGCGAACGTGTGACGTTTACGACTGGATTCGGGATTAAATTTGGCGTGTTTACGTGCTTCGACATGCTCTTCAAGTGTCCAGCTTTTGACTTAGTGTCCAAGTATGGCATACGAAACGTTGCCATGCCAACAGCATGGATGCATGGTTTCCCCACTCTTATCTCAGTGCAGTTTCAACAAGCTTGGTCGCGGGCTACCTGTGTTAATCTTCTGGCAGCCAATCATCACCAGCCGCTAGCTTCCATGTATGGTAGTGGGATATTCTCATGTGGGGAACCGAAAATCTACTTGTTTGATCCGCTGGCCACTAAGGACCAACGGCTCATGATAGCAACCTTAAAAGATATCGAGATTGCGCAGACTAACGATGATGTCATCTATGGTTCGGGCCCTGGGAGAAATGACGTCAAAGTACCAAGAAAGCCCCTCAACCCCGAACCACAGAAGTTTAAATGTAAGATAATGAACGACCTTTTCGATGTCGTTAGGCTAGAATCCAGCAAAGGGACACTCTCAGTTTGCCAAAACCAGTTCTGCTGTCATCTTGAGTACAAAGTAGCCAGTCAACTAACGGAGAGTTACGTGCTAGGAGTGTTCCGTGGCCCACACACTCCAGAACATTTCTACCTCGAAGTCTGCTTGCTTCTGAAATGTGCCAGCCACTACGAAGACTCGTGTGGACAAATTGTGGAAAGTGCGACAACCGTTTTTGACGACATTCACCTTTCTGGTAATTTCACACCGGCGGCGCATGTGTATCCGGAGTTGTGGGTCAGCGGTATGAAGCTCGTGGCGAAAGATGCGCTAAAGGTCAGCGGTCATACTGTCATGACAACGGAAGGGATGAGGGATCCTCTAATTTCAGCTGTGTTGCTTGGGCGTGACTATGCTAAGGATACAGCTGTAAAGGATTGA

Transcript

alvinactis_v1_g17330

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00795	CN_hydrolase	Carbon-nitrogen hydrolase	Family	Interproscan
PF14636	FNIP_N	Folliculin-interacting protein N-terminus	Family	Interproscan
PF14637	FNIP_M	Folliculin-interacting protein middle domain	Family	Interproscan
PF14638	FNIP_C	Folliculin-interacting protein C-terminus	Family	Interproscan
PF19018	Vanin_C	Vanin C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003010	Domain	Carbon-nitrogen hydrolase	Interproscan
IPR012101	Family	Biotinidase-like, eukaryotic	Interproscan
IPR026156	Family	Folliculin-interacting protein family	Interproscan
IPR028084	Domain	Folliculin-interacting protein, N-terminal domain	Interproscan
IPR028085	Domain	Folliculin-interacting protein, middle domain	Interproscan
IPR028086	Domain	Folliculin-interacting protein, C-terminal domain	Interproscan
IPR036526	Homologous_superfamily	Carbon-nitrogen hydrolase superfamily	Interproscan
IPR037545	Domain	Tripartite DENN domain, FNIP1/2-type	Interproscan
IPR043957	Domain	Vanin, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21634	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006807	Biological Process	obsolete nitrogen compound metabolic process	Interproscan
GO:0016811	Molecular Function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	Interproscan
GO:0042030	Molecular Function	ATPase inhibitor activity	Interproscan
GO:0051087	Molecular Function	protein-folding chaperone binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-