Detailed information of alvinactis_v1_g17314 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_8:21291110...21306867
NR annotation: XP_031574096.1, replication factor C subunit 1-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P35601Replication factor C subunit 1 OS=Mus musculus OX=10090 GN=Rfc1 PE=1 SV=2
P35251Replication factor C subunit 1 OS=Homo sapiens OX=9606 GN=RFC1 PE=1 SV=4
P35600Replication factor C subunit 1 OS=Drosophila melanogaster OX=7227 GN=Gnf1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08519RFC1Replication factor RFC1 C terminal domainDomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF00533BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008921Homologous_superfamilyDNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalInterproscan
IPR012178FamilyReplication factor C subunit 1Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR013725DomainDNA replication factor RFC1, C-terminalInterproscan
IPR001357DomainBRCT domainInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR047854DomainReplication factor C, lid domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23389CHROMOSOME TRANSMISSION FIDELITY FACTOR 18Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0003689Molecular FunctionDNA clamp loader activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005663Cellular ComponentDNA replication factor C complexInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10754RFC1; replication factor C subunit 1-DNA repair and recombination proteinsko03400deepkoala

TOP