Detailed information of alvinactis_v1_g17161 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_8:19249496...19284250
NR annotation: XP_020892038.1, uncharacterized protein LOC110231362 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BL74General transcription factor 3C polypeptide 2 OS=Mus musculus OX=10090 GN=Gtf3c2 PE=2 SV=2
Q8WUA4General transcription factor 3C polypeptide 2 OS=Homo sapiens OX=9606 GN=GTF3C2 PE=1 SV=2
Q5RDC3General transcription factor 3C polypeptide 2 OS=Pongo abelii OX=9601 GN=GTF3C2 PE=2 SV=1
 Gene family
Gene familySubfamily
Transcription Factors Familyzf-C2H2
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR017956Conserved_siteAT hook, DNA-binding motifInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR052416FamilyGeneral transcription factor 3C componentInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15052RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR COMPLEX SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000127Cellular Componenttranscription factor TFIIIC complexInterproscan
GO:0006383Biological Processtranscription by RNA polymerase IIIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15200GTF3C2; general transcription factor 3C polypeptide 2-Transcription machineryko03021deepkoala

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