Detailed information of alvinactis_v1_g17087 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_8:18055862...18088451
NR annotation: XP_031572868.1, DNA mismatch repair protein Msh6-like isoform X1 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E1BYJ2DNA mismatch repair protein Msh6 OS=Gallus gallus OX=9031 GN=MSH6 PE=3 SV=2
P54276DNA mismatch repair protein Msh6 OS=Mus musculus OX=10090 GN=Msh6 PE=1 SV=3
P52701DNA mismatch repair protein Msh6 OS=Homo sapiens OX=9606 GN=MSH6 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05192MutS_IIIMutS domain IIIDomainInterproscan
PF01624MutS_IMutS domain IDomainInterproscan
PF00488MutS_VMutS domain VDomainInterproscan
PF05190MutS_IVMutS family domain IVDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000432DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR007696DomainDNA mismatch repair protein MutS, coreInterproscan
IPR016151Homologous_superfamilyDNA mismatch repair protein MutS, N-terminalInterproscan
IPR007695DomainDNA mismatch repair protein MutS-like, N-terminalInterproscan
IPR045076FamilyDNA mismatch repair MutS familyInterproscan
IPR036187Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007861DomainDNA mismatch repair protein MutS, clampInterproscan
IPR017261FamilyDNA mismatch repair protein MutS/MSHInterproscan
IPR036678Homologous_superfamilyMutS, connector domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0032301Cellular ComponentMutSalpha complexInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08737MSH6; DNA mismatch repair protein MSH6-DNA repair and recombination proteinsko03400deepkoala

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