Gene detail

Detailed information of alvinactis_v1_g16306 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g16306	ALCOHOL DEHYDROGENASE	chr_8	5472824	5493938	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g16306

ATGGTTCACAGCAAAATCGCAGAAACTTGTCTTGCTGGAGGGCTATCGACTTGTTGTGCCAAAACTACCACGGCACCACTTGAACGACTCAAGATACTCTTCCAGGCTCAAAACAAGCATTACAAGAATATGAGTGTATTTGGTGCACTGAAGGCAATCTACAAGAAGGAGGGTACCCTGGGGTATTACAGAGGTAATGGAGCCATGATGGTGAGGGTTTTTCCCTATGGAGCTATCCAGTTTATGTGTTATGAGCAGTACAAGACTCTGTTCTGTGATACTCTTGACTATGGACACATTGGGAAGATGTTTGCTGGAGGACTTGCGGGCCTTTCAGCTTGTACATGCACATATCCCTTGGATGTTGTCAGATCCAGACTTGCATTTCAAGTTGCGGATGAGCATCGTTACTGTGGCATTTGCTCCACTCTTCGGCAGATTTGTTCCACTGAGGGGGGTGTATGCGCACTGTACAGAGGGTTTACTCCCACTGGTCTCTCCATGATTCCTGCAGTTGGCCTGGGATTTTATGCTTTCGAGTCGTTCAAAGATTTCATTGTTTCCCTGCATGGAACCATGACGAGAGTTCATCCAATCAGTGGCGAGACTGTGTTAACAGCCACTGGTGGTCTTGTGTGTGGTGCATTATCTGGAGCATCATCCCAGACTGTTGCGTATCCTCTGGATGTTGTAAGGAGGAGAATGCAGCTTGCAGGATCTTTAGCTGACGGTCACAAATACAAAACTTGCATCAGCACATTTATCGCAGTGTACACTGAGGATGGTGTGAGGCATGGTCTTTATCGAGGCCTGTCAATCAACTATCTTAGGGTGTGTCCTCAAATTGCTGTGATGTTTGCCGTGTATGAAATGACAAAACAGATGTCCGATACTGCAGGAAAGCCAATCCAGTGCAAAGCTGCTGTGGCCTGGGAAGCAAACAAGCCACTCAGCATAGAAACCATTGAAGTTGCACCACCGAAGGCTGGCGAAGTCCGTCTAAAGATCCTTGCGACAGGTGTCTGTCATACTGACGCATACACCTTGAGTGGTATTGACCCTGAAGGGCTCTTTCCCTGTGTGCTTGGACATGAAGGGGGTGGTATTGTGGAGAGTGTTGGTGAAGGTGTCACTCGTGTTAAAGCTGGTGACCATGTAATCCCCACCTACATACCACAATGCAATGATTGCAAGTTCTGCAAAAATCCCAAGACAAATCTGTGCGGTAAAATCAGGTCCACCCAAGGGAAAGGAGTGTTACCAGATGGTACTTCAAGGTTCACCTGTAAAGGACAAACTTTATACCATTTCATGGGCACAAGTACTTTCAGTGAATACACTGTAGTGGCAGAAATCTCATGTGCTAAAGTTAATGAAAAAGCTCCACTGGACAAGGTATGCTTACTTGGTTGTGGCATATCAACTGGTTATGGTGCAGTGCTAAATACTGCCAAGGCAGAGCCAGGTTCCACTGCTGCTGTCTGGGGTCTGGGTGCAGTTGGTCTTGCTACTATTATGGGATGTAAAGTGGCTGGTTGCAGTAGGATTATTGGAGTTGACATTAACCCTGCAAAGTTTGAGTTGGCCAAACAGTTTGGGGCAACTGAATGCTTTAATCCTAAGGATCACGACAGACCAGCACAGGAGATTTTGGTTGAAATGACTGATGGAGGCCTAGACTACACATTTGAGTGTATTGGCAATGTCCACACCATGCGTCAAGCACTTGAAGCATGCCACAAAGGCTGGGGAATGTCTGTAATTATTGGTGTTGCAGGAGCAGGAAAAGAGATTTCAACTCGCCCTTTCCAGCTTGTAACTGGTCGTGTGTGGAAAGGAACTGCTTTTGGAGGATACAAGAGTGGCGATGGTGTTCCAAAACTTGTAGAAGACTACTTAGCTGGAACTCTGAAAGTGGATGAGTTTATAACCCACAATCTACCTCTAGACAAAATCAATGAAGGTTTTGCACTGATGCACAGTGGAGAGAGAAATATGATGACAACAACATTGACGCGACAGCAGCTCAACATTGATGATATAGTAGTCATGATGATTACAATGTATGGCATTGTAGACACtgatggtgatgatgatgatataaataaaaacaatagatgttga

Transcript

alvinactis_v1_g16306

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00107	ADH_zinc_N	Zinc-binding dehydrogenase	Domain	Interproscan
PF00153	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan
PF08240	ADH_N	Alcohol dehydrogenase GroES-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002067	Family	Mitochondrial carrier protein	Interproscan
IPR002167	Family	Solute carrier family 25 member 16-like	Interproscan
IPR002328	Conserved_site	Alcohol dehydrogenase, zinc-type, conserved site	Interproscan
IPR011032	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR013149	Domain	Alcohol dehydrogenase-like, C-terminal	Interproscan
IPR013154	Domain	Alcohol dehydrogenase-like, N-terminal	Interproscan
IPR014183	Family	Alcohol dehydrogenase class III	Interproscan
IPR018108	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR023395	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43880	ALCOHOL DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004024	Molecular Function	obsolete alcohol dehydrogenase (NAD+) activity, zinc-dependent	Interproscan
GO:0005743	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006069	Biological Process	obsolete ethanol oxidation	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0046294	Biological Process	formaldehyde catabolic process	Interproscan
GO:0051903	Molecular Function	S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-