Gene detail

Detailed information of alvinactis_v1_g14255 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_7:4991175...4993284
NR annotation: XP_028513178.1, nuclear nucleic acid-binding protein C1D [Exaiptasia diaphana]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5ZHS3	Nuclear nucleic acid-binding protein C1D OS=Gallus gallus OX=9031 GN=C1D PE=2 SV=1
Q7TSU0	Nuclear nucleic acid-binding protein C1D OS=Cricetulus griseus OX=10029 GN=C1D PE=2 SV=1
O35473	Nuclear nucleic acid-binding protein C1D OS=Mus musculus OX=10090 GN=C1d PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04000	Sas10_Utp3	Sas10/Utp3/C1D family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011082	Family	Exosome-associated factor Rrp47/DNA strand repair C1D	Interproscan
IPR007146	Family	Sas10/Utp3/C1D	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15341	SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000178	Cellular Component	exosome (RNase complex)	Interproscan
GO:0000460	Biological Process	maturation of 5.8S rRNA	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0010468	Biological Process	regulation of gene expression	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12592	C1D, LRP1; exosome complex protein LRP1	-	Messenger RNA biogenesis	ko03019	deepkoala