Detailed information of alvinactis_v1_g14197 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_7:4383581...4400230
NR annotation: XP_028515277.1, low-density lipoprotein receptor-related protein 2-like isoform X1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A1Z877Nidogen OS=Drosophila melanogaster OX=7227 GN=Ndg PE=1 SV=1
C0HL13Low-density lipoprotein receptor-related protein 2 OS=Sus scrofa OX=9823 GN=LRP2 PE=1 SV=1
O88572Low-density lipoprotein receptor-related protein 6 OS=Mus musculus OX=10090 GN=Lrp6 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12947EGF_3EGF domainDomainInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12946EGF_MSP1_1MSP1 EGF domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR024731DomainEGF domainInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR009017Homologous_superfamilyGreen fluorescent proteinInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR024730DomainMerozoite surface protein, EGF domain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24039FIBRILLIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP