Gene detail

Detailed information of alvinactis_v1_g13842 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g13842	DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7-RELATED	chr_7	269590	280702	+

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g13842

atgtcgtgtccaacatcaccattcagtaaagtcgctggcaactcaacgtttgaaatccgtgtctaCAATCTTCTGCAATATAATAATTTAATAATAATATGTAGACAAGACACCTATAATCCCTTCCCCTCCGTGTTGATCAGTGATGGTTGTAATAATCTGATGCTATGCAATGAAAAGGGGGAGGAGGGGTCGGGGgacatacccagaaagctttgcgatttatgggataaaatgagggggactgTTTTCATTCCATTGTTTGGTGTTTCCGTTTATTTCTTACGTCATTACCAAGATGCTGACTTGACTGTGCATTTTTATGAAAAGTTTGGTGCAAAACCTTGTAGATTGCTTGAAGGTAAAGTTGTATGGATTACTGGAGCGTCTAGTGGGATTGGCGAGTACTTGGCCTACGAACTCTGTAAATGTGGCTGCAAACTGGTCTTATCTGCACGGAGAAAAGACGAGCTACAGAGAGTTAAAGATAAGTGTACAGGACGGTCTCAACGTAGTTGGGTCAAGGACACACCCTTGGAAGTTGAACAGGAATTACTGAATCTGAACCTTGTTGGAACAATGTCGTTGACTAAAGCTGTTCTTCCTCATATGTTAGAGATGAACCAAGGGCAGATTGTGGTAGTTAGCAGTGTCATGGGAAAGTATGGTTATCCTTTTGAAGCTGCCTATTCTGCCAGCAAGTTTGGACTTCATGGTTACTTTGATAGTCTACGCATGGAAATAAGTGATACAAACATCAATGTACAGGTTGTTTGCCCAGGCCCTGTAAATTCTCATGTTGCAGCAAATGCATTTACTGAAATTAAAAACAAGTCTTTCAAAGACTCACCATTATACAGTGATAAGACTGTACGAATGCCAACAGAACGCTGTGCTTATCTAATGACTGTTTCTATGGCAAATAGTTTAGATGAAGTCTGGATTTCAACCCATCCATGTTTAGCATTGACTTATATGTGCCAATACATGCCAAGAACTTTTCAGTGGTACTCTAGAACACGATTTATGTGGCTTGTGGCTTTGGTTGTTCTTTCTTTTCAGTTGACTCAAAGCTGTCATAGCTATCATCAACACAGCCACAAGAGAGTACTGGATCAAGCAATGTGTGGCGTAAGGGTGTACAATGATGAGGAGAAACGCATTGTGGGGGGTAGCCCAAGTAAAGCTGGCGCATGGCCTTGGCAAGTTGCACTGTTGGTTAAAAGGTTCAATGACTCTCAATTGTGTGGTGGATCTCTAATATCACCCGAGTGGGTCGTATCAGCTGGGCATTGCTTCTTGCAGATGGGTCTTACAAAGAATCCTAAAGAATGGAGCGTAACTCTAGGAGAACATCATTTGGTGAACAAGGATTGGTTTGAACAGTCTCGGTCTGTGCGCGCCATTTATACGCATCCTGATTATAAATCTGCACAAGAAAAGGCTGTAGATCAAGACACTCTGGTGTCAACACCACCAGACTATGACTTGGCTGTATTACGACTATCTAAACCAGCTGTTCTGGACAACTTTGTGTCTCCCATCTGTCTTTTGCCAAAAGGCGCTCGGTTCGATAAAGGTAAAGAATGTTACGTCACAGGATGGGGTGTAACAAACTGGAAAGGACGCAAACCCGACGTACTAAGGCAAGCCAAGGTCTCTAATCGTGCTTTGTGCGCTGGCTTTGAACAAGGTGGAGTTGACGCATGTCAATACGACAGTGGTGGACCGCTGGCTTGCAATCATAACGGACGATGggaaacccactatgccttaaatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacctagggaaacccactatgccttacatcctctgacaacacccagagaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgtcaacaccaagggaaacccactttgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacactcagggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgtcaacacccagggaaacccactatgccttacatcctgtgacaacacccatggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacccatggaaacccactatgccttacatcctctgacaacacccatggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacccatggaaacccactatgccttacatcctctgacaacacccatggaaacccactataccttacatcctctgacaacacccagggaaacccactatgccttacatcctctgacaacacccagggaaacccactatgcctag

Transcript

alvinactis_v1_g13842

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00089	Trypsin	Trypsin	Domain	Interproscan
PF00106	adh_short	short chain dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001254	Domain	Serine proteases, trypsin domain	Interproscan
IPR002347	Family	Short-chain dehydrogenase/reductase SDR	Interproscan
IPR009003	Homologous_superfamily	Peptidase S1, PA clan	Interproscan
IPR018114	Active_site	Serine proteases, trypsin family, histidine active site	Interproscan
IPR020904	Conserved_site	Short-chain dehydrogenase/reductase, conserved site	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR043504	Homologous_superfamily	Peptidase S1, PA clan, chymotrypsin-like fold	Interproscan
IPR053011	Family	Dehydrogenase/reductase SDR family member 7	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44269	DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004252	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-