Gene detail

Detailed information of alvinactis_v1_g12634 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g12634	ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6	chr_6	9746388	9757365	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g12634

ATGGCCGACGATGTTGATGTGAGTTTTGACTCGAGAGAAGAACTTGAACAGCTATTCACAGAAGCAACAGATTACGTTAAAAGTATACATGGACTTCGCGACGAAGATAAACTACTATTTTACGGGTTATTCAAGCAGGCCAGAGAAGGCCCTTGCAAGACATCAAAACCTGCATTCTGGGACTTTGTTGGGAAAGCAAAATGGGAGTCGTGGAAGCTTCTAGAGAAAATGGACAAAGAAGCAGCCATGAAAAATTACATCAAGAAACTCTTTAGTGTTGATCCTGAGTGGGACATCAAATATGTGACCTGTACAGATAAAAGTGCAATATCTGCCTCCAGTCATCAGGTACACGAGAAACAGACAATGGGTCTCGCTGTCAGTACATTACGATGTGGATCACCTGATGAAATCATTAGTGATGCTAACAAGACCATATTTGATTGGTGCAAAGAAGGCAATGTAAAGAGAATGGATATGATGCTGTCCAAAGCAGAAGATATTAACACAAAGGACAGCCAGGGAATAGCATTACTTCACTGGGCTTGCGATCGTGGCCATGAACATGTAGCCGATTACCTCATCAAAAATAAAGCTGATGTCAATATTACAGATGGCGAAGGACAAACACCACTTCATTATGgggcagtgatggtgatggtgatgtcaggagctcatgatgacgatagagatgatggtgatgacaatgattacactgatggggtaatgatgatgatgGAACTGAAACCTAGCAACACAAGTGCAAGTATAAtacaccaacaagacaaacgctacatagtacaccaacaagacaaaTGTTGCGAAAAGCATTGcaaccaccactacccggcaccacaaccaacaacaacaacaaccatcactaccaccaccaccattaccaccacctcaaccaccaccaccactacccagcaccacaaccaacaacaaccatcactaccaccaccaccactaccaccacctcaaccaccactacccggcaccaccaacaacaacaaccatcaccaccaccaccattaccaccacctcaaacaccaccaccactaccacaactacccggcaccactaccaccacctcaaccaccactacccgtcaccaccaacaacaacaaccatcaccaccactaccaccaccattaccaccacctcaaccaccaccaccactaccaccactacccggcaccaccagcaacaacaaccatcaccaccactaccaccaccattaccaccacctcaaccaccactacccggcaccaccaacaacaacaaccatcaccaccactaccaccactaccaccaccattaccaccacctcaaccaccaccaccactaccaccactacccggcaccaccattaccattaccaccaccacaatcaccattaccaccaccaccaccactacccggcaccaccaacaacaacaaccatcaccaccactaccaccaccaccactaccaccaccattaccaccaccaccaccacaatcaccattaccaccaccaccaccactacccggcaccaccaacaacaacaaccatcaccaccactaccaccacctcaaccaccactaccaccactatccggcaccaccaccaacaacaaccatcgccaccactgccaccaccattaccaccacctcaaccaccactacccggcaccaccaacaacaacaaccatcaccaccactaccaccaccattaccaccacctcaaccaccactaccaccaccacaatcaccattaccaccaccaccaccactacccggcaccaccaacaagaaccatcaccaccactaccaccaccattaccaccacctcaaccaccactacccggcaccaccaccaacaacaaccatcaccattaccaccacctcaaccaccactacccggcaccaccaacaagaaccatcaccaccactaccaccaccattaccaccacctcaaccaccactaccaccaccacaatcaccattaccaccaccaccaccactacccggcaccaccaacaacaaccatcgccaccactaccaccaccattaccaccacctcaaccaccactacccggcaccaccatcaacaacaaccatcaccaccactaccaccaccattaccaccacctcaaccaccactaccaccaccacaatcatcattaccaccaccaccaccaccactacccggcaccaccaacaagaaccatcaccaccactaccaccaccattaccaccacctcaaccaccactactcggcaccaccaccaacaacaaccatcaccattaccaccacctcaaccaccactacccggcaccaccaacaagaaccatcaccaccactaccaccaccattaccaccacctcaaccaccactacccggcaccaccaccaccaacaaccatcgccaccaccaccaccactacctggcaccaccaccaccaacaaccatcaccactacctcgaccaccactacccggcaccaccaccaacaacaaacatcaccactaccaccCCCGAGCAACCATGTAACAATAGAATTCAATACAATACaaattaa

Transcript

alvinactis_v1_g12634

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00887	ACBP	Acyl CoA binding protein	Domain	Interproscan
PF13637	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000582	Domain	Acyl-CoA-binding protein, ACBP	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR014352	Homologous_superfamily	FERM/acyl-CoA-binding protein superfamily	Interproscan
IPR035984	Homologous_superfamily	Acyl-CoA binding protein superfamily	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24119	ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000062	Molecular Function	fatty-acyl-CoA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-