| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g12535 | LIM/HOMEOBOX PROTEIN LHX | chr_6 | 8014036 | 8037397 | + |
| CDS | |||||
| alvinactis_v1_g12535 | |||||
| Transcript |
| alvinactis_v1_g12535 |
| Protein |
| alvinactis_v1_g12535 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | Homeobox |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00046 | Homeodomain | Homeodomain | Domain | Interproscan |
| PF00412 | LIM | LIM domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001356 | Domain | Homeobox domain | Interproscan |
| IPR001781 | Domain | Zinc finger, LIM-type | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR050453 | Family | LIM/homeobox transcription factors | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24208 | LIM/HOMEOBOX PROTEIN LHX | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000977 | Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | Interproscan |
| GO:0000981 | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0030182 | Biological Process | neuron differentiation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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