| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g12342 | F-BOX/WD REPEAT-CONTAINING PROTEIN 5 | chr_6 | 5065041 | 5067799 | + |
| CDS | |||||
| alvinactis_v1_g12342 | |||||
| Transcript |
| alvinactis_v1_g12342 |
| Protein |
| alvinactis_v1_g12342 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF12937 | F-box-like | F-box-like | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR001810 | Domain | F-box domain | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR036047 | Homologous_superfamily | F-box-like domain superfamily | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR042508 | Family | F-box/WD repeat-containing protein 5 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR20995 | F-BOX/WD REPEAT-CONTAINING PROTEIN 5 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0019005 | Cellular Component | SCF ubiquitin ligase complex | Interproscan |
| GO:0080008 | Cellular Component | Cul4-RING E3 ubiquitin ligase complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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