Detailed information of alvinactis_v1_g12222 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g12222RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEINchr_636462973661202-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors Familyzf-CCCH

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF04775Bile_Hydr_TransAcyl-CoA thioester hydrolase/BAAT N-terminal regionFamilyInterproscan
PF08840BAAT_CBAAT / Acyl-CoA thioester hydrolase C terminalDomainInterproscan
PF18386ROQ_IIRoquin II domainDomainInterproscan
PF21206Roquin_1_2-like_ROQRoquin 1/2-like, ROQ domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR006862DomainAcyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferaseInterproscan
IPR014940DomainBAAT/Acyl-CoA thioester hydrolase C-terminalInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR041523DomainRoquin IIInterproscan
IPR042490Homologous_superfamilyAcyl-CoA thioester hydrolase/BAAT, N-terminalInterproscan
IPR048575DomainRoquin 1/2-like, ROQ domainInterproscan
IPR052249FamilyRoquin domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13139RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0000288Biological Processnuclear-transcribed mRNA catabolic process, deadenylation-dependent decayInterproscan
GO:0003725Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0010494Cellular Componentcytoplasmic stress granuleInterproscan
GO:0035613Molecular FunctionRNA stem-loop bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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