Detailed information of alvinactis_v1_g12176 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_6:3060164...3089009
NR annotation: XP_020904938.1, spectrin alpha chain, non-erythrocytic 1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P16086Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2
Q13813Spectrin alpha chain, non-erythrocytic 1 OS=Homo sapiens OX=9606 GN=SPTAN1 PE=1 SV=3
P16546Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018SH3_1SH3 domainDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan
PF08726EFhand_Ca_insenCa2+ insensitive EF handDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001452DomainSH3 domainInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR035825DomainAlpha Spectrin, SH3 domainInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR014837DomainEF-hand, Ca insensitiveInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06114SPTAN; spectrin alpha, non-erythrocytic (fodrin)-Cytoskeleton proteinsko04812deepkoala

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