Gene detail

Detailed information of alvinactis_v1_g11957 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_5:30938265...30953396
NR annotation: XP_020910946.1, calcium-binding mitochondrial carrier protein Aralar1 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g11957

ATGCTTGACGATATAAAGGACAAGCTATGGAGGGCTACCTTTGGAGGGCTGATCTCCAAAGCAAATTGTACCGCCATAATTGTGGATTATTCTGTAAAGCCAGCCGATCCAAAGGAACTTCAACGAATATTCAACAAGTATGCTAGCATAGAACGTCAAGGTCACAAATACATGACTCCTGAAAACCTCATCAGAGACTACTTGGGAATGCAGAAGGTTAAAGAGTATAATGCAACCACATTGTCTTTATTGGCAGGGGTTGTCGACCAGACCAAAGATGGGCTTATTTCCTTCAGTGAGTTTCTTGCATTTGAGGGTCTTCTTCGTGATCCAGACAGTTACCACAAATTGATCTTCCAGTTATTTGACTTGGATGGTAAAGGTTCTGTTTCTTTTGATGAGTTCCAGACAGTTGTGAGGAAGACATATTTCTACACGGACATACCATTCAATTTTGACACTGATTTTAGCTTCAATTATTTTGGAACAAAGAAAGAATTGCGTGTCTCATTTCATGAGTTTTCACATCTTCTTCAGGACTTTGAGCGAGAGTACCAGCGTCAGGCATTCTTCAAATCCAAAATGACAGACAATGAAATATCAGCTGCAACGTTTGCAGAGATTATGAAGACACTAAGAGGTCATCGTCTTACTCCTTATGTCCGTGCATATCTCTTAACAGTTGGTGGCGAAGCTCGCCATCGCGTCAGTTATGGCTACTACAGGGCTTTCAACAGCATGCTTGATAATATACTACTGTTTCATGACGTTTCACAAAAAGTTGCCAAAGGGAAACGATACAAAGAAATTAAAAAAGAGGACTTTTTGAATGAAGTTCTCAAGACACACCCTGAGGTCACTCCTCTACAAGTAGACATTCTATATCATCTTTGTGACATGGACAGAAGAGGGCGCATAACAATTTCAGATGTCCATCACATGTTGCCAAAGTATGATGTTTTCAAAGTATTTTCAACTGAACGTCATGATGAAGAGATGATACAAGAACCAGAAGAGCATCAAGTGTCGATCGCTTGGACAGCATTTCATCAGCTATATAGATTTGCACTTGGATCCATAGCTGGAGCTACTGGGGCATGTGCAGTATATCCTATCGACTTAGTCAAAACACGAATGCAGAACCAACGTGCAGTATTGGAAGCAGAAAAAATGTACAAAAACAGTTTCGACTGTGCTGTGAAGGTGTTCAGGAATGAGGGTGCTCGTGGATTTTATCGAGGTCTCTTACCTCAGCTTGTGGGTGTATCTCCAGAAAAGGCCATCAAACTAACAACTAACGACATGGTACGAGGTTTTTTTAGTGATGATGACGGTTTTATCAGTCTAAAATACGAGATCATCGCTGGTGGTTGTggtggtgctgcacaagtactctttaccaatcccctcgaaatcGTGAAAATTCGTCTGCAAGTTGCAGGAGAGCAGAAGAGCGGCCAAGCCCATAGAGTGACAGCCTTGTCTTCTATTAGGGAATTGGGTTTAAGTGGACTCTATAGGGGTGCTCGAGCGTGCTTTATACGTGATATTCCGTTTTCTGGTATTTACTTTCCGTCATACGCACATTTTAAACTATATTTTGCTGACGAAAATGGCCACAATGGAGCTGGTAGTCTGTTCGGATCAGCTATGTTGGCAGGCGTGCCAGCGGCTTTCCTAGTCACTCCAGCGGACGTTATTAAAACCAGGTTACAGGTCAAAGCACGCCGAGGACAGCAAAGCTACAGAGGCGTTTTTGATGCCGTTTCAAAAATCTGGAAGGAAGAAGGCGCGCGAGCTTTTTGGAAAGGCGGCGGAGCTCGTGTTATACGTTCATCGCCACAGTTCGGTGTAACGCTGCTGACCTATGAACTCTTACAACGACTATTTAACGTTGATTTTGGAGGCACTACTACCAGTTCTAAATCAGATATGATACCTACCAACCCCGACCTCTCACTCAACCCCGACCACATTGGGGGCATGCGCGTTGCCGTGGCAACGTATGCCGGCATCGAGACGAGGTTCGGACTTTGCCTCCCGAAATTCCGCACGCCCCAAAGATTGACTCTTCATCCAAGTGAACCCAAATGA

Transcript

alvinactis_v1_g11957

Protein

Uniprot

Uniprot term	Description
O75746	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial OS=Homo sapiens OX=9606 GN=SLC25A12 PE=1 SV=2
Q5RBC8	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial OS=Pongo abelii OX=9601 GN=SLC25A12 PE=2 SV=1
Q8BH59	Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a12 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan
PF00036	EF-hand_1	EF hand	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018108	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR051028	Family	Mitochondrial Solute Carrier	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR023395	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR002067	Family	Mitochondrial carrier protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45678	MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005313	Molecular Function	L-glutamate transmembrane transporter activity	Interproscan
GO:0006810	Biological Process	transport	Interproscan
GO:0015183	Molecular Function	L-aspartate transmembrane transporter activity	Interproscan
GO:0015810	Biological Process	aspartate transmembrane transport	Interproscan
GO:0015813	Biological Process	L-glutamate transmembrane transport	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0043490	Biological Process	malate-aspartate shuttle	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15105	SLC25A12_13, AGC; solute carrier family 25 (mitochondrial aspartate/glutamate transporter), member 12/13	-	Transporters	ko02000	deepkoala