Detailed information of alvinactis_v1_g1186 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_1:20218094...20228386
NR annotation: XP_020903798.1, trimethyllysine dioxygenase, mitochondrial-like [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q91ZE0Trimethyllysine dioxygenase, mitochondrial OS=Mus musculus OX=10090 GN=Tmlhe PE=1 SV=2
Q91ZW6Trimethyllysine dioxygenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tmlhe PE=1 SV=2
Q5F4B3Trimethyllysine dioxygenase, mitochondrial OS=Gallus gallus OX=9031 GN=TMLHE PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02668TauDTaurine catabolism dioxygenase TauD, TfdA familyDomainInterproscan
PF06155GBBH-like_NGamma-butyrobetaine hydroxylase-like, N-terminalDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038492Homologous_superfamilyGBBH-like, N-terminal domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR003819DomainTauD/TfdA-like domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR000483DomainCysteine-rich flanking region, C-terminalInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR010376DomainGamma-butyrobetaine hydroxylase-like, N-terminalInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR042098Homologous_superfamilyTaurine dioxygenase TauD-like superfamilyInterproscan
IPR050411FamilyAlpha-ketoglutarate-dependent hydroxylasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10696GAMMA-BUTYROBETAINE HYDROXYLASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0045329Biological Processcarnitine biosynthetic processInterproscan

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