Gene detail

Detailed information of alvinactis_v1_g11687 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_5:26573782...26597124
NR annotation: RUA06209.1, hypothetical protein DSY43_02670 [Gammaproteobacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g11687

atgCTAGTGTTTACTGACAAGGAAGATAATGACATCCCGTTGGTAGTAAAATTCACTACAGtacgtcccggtacaccaacgattaaactacatgcattgtcagatcagaataacaacgtgaaagtggcctgtaacacgacagttggtataccaaaagacaccactctcacattttatcgaaacaatgaaattgttgcagagaaaaatggaacacggaatggcaataacaccgaggcaacagttaccatagatctagtggcagggatcaactcgtttagatgtcaggcgagtactatcttaggtggatggtctaacttcagcgatgaagtcattgttacagtaacagtacgtcccggtacaccaacgattaaactacatgcattgtcagatcagaataacaacgtgaaagtggcctgtaacacgacagttggtataccaaaagacaccactctcacattttatcgaaacaatgaaattgttgcagagaaaaatggaacacggaatggcaataacaccgaggcaacagttaccatagatctagtggcagggatcaactcgtttagatgtcaggcgagtactatcttaggtggatggtctaacttcagcgatgaagtcattgttacagtaacagtacgtcccggtacaccaacgattaaactacatgcattgtcagatcagaataacaacgtgaaagtggcctgtaacacgacagttggtataccaaaagacactactctcacattttatcgaaacaatgaaattgttgcagagaaaaatggaacacggaatggcaataacaccgaggcaacagttaccatagatctagtggcagggatcaactcatttagatgtcaggcgagtactatcttaggtggatggtctaacttcagcgatgaagtcattgttacagtaacagtacgtcccggtacaccaacgattaaactacatgcattgtcagatcagaataacaacgtgaaagtggcctgtaacacgacagttggaattccaaaagacaccactctcacattttatcgaaacaatgaaattgttgcagagaaaaatggaacacggaatggcaataacaccgaggcaacagttaccatagatctagtggcagggatcaactcgtttagatgtcaggcgagtactatcttaggtggatggtctaacttcagcgatgaactcacttttccaggaacagTTTCTAATGATCTACGCCTGAAGTTTTGGAACGTTGAAGTCATCAGTTCAACTCGTGTATTCACTACTTGGAAATATGTCGAGGAGCCGCATACTCATGGCATTCTGAGTACCAGGATAACATTCACCAATAAAAATTCTGGTGTTTCAAGAATTTATGAGTATGCGGCAGAAGAAATAATGGGGGATAATTTGAAACTGGAAGCGTTCACTGAGTACTTGGTGCAATTCTGTGGAGTCACCTCCAAAGGTTGTGGAATTGCAGCTGAAAAGGCTGTCAAGACTCTAGaggacaTTCCAACACTTCCGCCACAGAATACAAAAGCTGTTAATCTGACGAATACCTCTCAGATAACGCTTTTGTGGGACCCAGTTCCCATAAGTGCCATGAAGGGCATAATTCTCCATTACACGCTAAAATATCGGGTGTATCTGGGTGATGATGCAAAATATACAAATGTAGAATCTTCCCTGGTGACTGTGGCAATGGCATTTAAGAACACGATACACTGGACAGTTCCTGTGTTGCTTTTGGCCTCCTCGGCTGGTATCATTATCTGGTTTCTGATTGCTGCCATTCAAAACTCCTCTGAGTATCAATACGGAGTCCAAATGAATGCACAAGTAAATCCAGTGAGGCCATATCGTACTGTAGTGGATATGATTGTTGCTTTGGAAACTCGTGAAGTCACGGGTGCTCTCCTAGATGCAAACATTGCTGCTGAGAAGTCAGCATTGTTTATCAAGGCAGGAGTGCAAGTGGCCAAAATACCTAACATTAGCAATCCTCAAACCAAGtcgtctgttctcttcaacttctcttctccactcttTTGGAGAGTAATTTACGTGGTTGGTGGATTGCTGTGTTTTACATACCTGATTGGGATGTTGTTTGTATGTATTCGCAATGGATGGAAGAAGAAAAATAAAGTATCTCCCATATTAGTGGCTGCAGAAAATGCTTCCTACAGGGATGCTGTAAATGCATCAAGAGAGGAAGTTAGAACCTTCAGGGACACCGCTCTTGCTGATTTGCAAGAAATGAAAGATAAACATACAAGAGAAGTACAGCAGTCGACGCTgaagaaagaagaaagccagagagcaggcaaaaaaaacaaaaaaaaacgaaagctgaataggaagaagaaaTTACAGTCTAACCTCTCCACAACGGCCACCTAA

Transcript

alvinactis_v1_g11687

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan