| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g10854 | TRNA PSEUDOURIDINE SYNTHASE D | chr_5 | 13159353 | 13171037 | - |
| CDS | |||||
| alvinactis_v1_g10854 | |||||
| Transcript |
| alvinactis_v1_g10854 |
| Protein |
| alvinactis_v1_g10854 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01142 | TruD | tRNA pseudouridine synthase D (TruD) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001656 | Family | Pseudouridine synthase, TruD | Interproscan |
| IPR011760 | Domain | Pseudouridine synthase, TruD, insertion domain | Interproscan |
| IPR020103 | Homologous_superfamily | Pseudouridine synthase, catalytic domain superfamily | Interproscan |
| IPR042214 | Homologous_superfamily | Pseudouridine synthase, TruD, catalytic domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13326 | TRNA PSEUDOURIDINE SYNTHASE D | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001522 | Biological Process | pseudouridine synthesis | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0009451 | Biological Process | RNA modification | Interproscan |
| GO:0009982 | Molecular Function | pseudouridine synthase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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