Gene detail

Detailed information of alvinactis_v1_g1083 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g1083	EGL NINE HOMOLOG-RELATED	chr_1	18432214	18444063	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g1083

ATGCGATGGTACGGAGCTCGTTCGTTTCTCCTCCACTGGCCGCAGTTGTACGCCGGGACAATGTGGATGGACAGTCGAGTTGCGCACGACACCAGCCAACAGAGTTGCAAACCATGCTGCGAGTTTTGCAACGCTGAAATACCTGACATCGTAGCAGGACACTTTCGATGCGTTCACTGCACTACAAACTACTGTTCAAAGGAACACAAAAAGGCTGATTTTAGGTTCCACAAACAACGCTGTCGAAACTTTCCAGTCGACACTCTGCAAACAAACGACACGTCTTTATCCGATTCTCTGTCGCCTGCAAATGCTCCACAGTATGTACAACAGTTTGGGAACGCCGAAAGTCTTCAAAGTCCATACCAAGAACTAAATTCTGCACGATTTACTCAGGGCTCACTTAATCCCCTCGGGGTTCAAGATGCCTGCCAAGTTGACACAAGAGTTTCGACAACTACATCCTTACAGCATTCTCCAACCATTGCCGCTGCTAGTTCATCCAGGCTTCAAGTAAGTCCAAAAGGACAACAACTCAACTATCAGTACTATCAGGCATCTCAAAGTCAAGCGCATTCTTTCCAGACTCAGCTGCAGTTATCTCCAGTTCAAACTAACGACGTTCAAAATACATCGCCAACTGGAGTACAAACGGTGACTGTTCAAAACGCACCCATTGAAATACAAAATGCAAATCCTGTTTCTAATGACGATCAGATTCCTTTAGATGACGTTTTAGAATCTTTTCTTCAAGATGCGGAACAGTACGACAGTCGGGCTGAAGACTCGAAACAACCCGCAACACTACCTCGAAATCTCTTGGGCATCCTTAGGGACCTGACGAAACAGAGAGAGGAACAACTTTTTTACGATGAACTTCTATCGTTAGAGCCGTCTACCAACACAGTAAGTGCAAAGCGACTGCCAAGCTCACAGCCAAATACTTGCAACAAAGACACTGATGAAACAGTACTTCAGTCTACAGTTGGTCTGTCATCACAGGTTGGCACGAGCGAGCAGATCACTGCAAAGATTATTGAACATTTCGAGGATCATCATTCCAGCGGCATAGCCGGCACTCCAACCCTCGAGGAAGAGGGAATATTCCCGAGATACAACTTAAATGAAGTTGCTGAATGCATCGTGAAAAGCTTAGATATTCACAATTACTGTATCATAGACAATTTACACGGGGTTGCCATGGCAACAGCTATCCTCGAAGAAGTCCAGCAGTTTCACGAAGAGAAGGCTTTCTCTGAAGGACGTTTATCGACGTCTGACGTCAAACATGGCACTGCTAACAAGGCTGTACGGGAAGACTTGGTTGCATGGACCGATGGTAAAGGACGTAAGGCCATCAGGAAACACATGGGTCGTGTGGACTTCTTGATGAAGCTTTGCAATAGGTTCATCACAGAATGTCAGATATCGTCCAGGACACAGGCAATGGCAGCCTGTTATCCTGGCAAGGGATCAGGGTACAAGCAACATATAGACAATCCCAATAAAGATGGTCGTTGTATTACTACATTGTACTATCTTAACCCTAACTGGAATATTGAGACCGATGGTGGATTGCTTAGGCTGTTTCCCAATGGAATAGTTCGAAAAACCGTGAATATCGAACCGATATTTGATCGACTGCTGTTCTTCTGGTCGGACAGACGGACCCCCCACGAAGTAACTCCAGCTTTTAAAATCAGATATGCTATTACCCTATGGTACTTCAACGACGAAGAAAGAAAGAAGTACTTTCAACAAAACGAACCAAAACTGATCTCAGTGTCGTTTGTCGATGGCAGTTCAGATGAGATCATAAGAGTATCAAGAGAGGAGACATCGTTCACTACCAGATGGGATGTGCTACGCATCGGCAGTGCAAACATGCAAGAGCTCAGCCTTGTAAATGATGCAACTCACAGTCACATCATCACAAGGGATTTCCCTTCGCACATCAAATCACAACAGAACTGTCTTTCAATGGAAAAGCAAGTCAGCACGTGA

Transcript

alvinactis_v1_g1083

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13640	2OG-FeII_Oxy_3	2OG-Fe(II) oxygenase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005123	Domain	Oxoglutarate/iron-dependent dioxygenase	Interproscan
IPR006620	Domain	Prolyl 4-hydroxylase, alpha subunit	Interproscan
IPR044862	Domain	Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain	Interproscan
IPR051559	Family	Hypoxia-inducible factor prolyl hydroxylases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12907	EGL NINE HOMOLOG-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0008198	Molecular Function	ferrous iron binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0031418	Molecular Function	L-ascorbic acid binding	Interproscan
GO:0031543	Molecular Function	peptidyl-proline dioxygenase activity	Interproscan
GO:0071456	Biological Process	cellular response to hypoxia	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-