Detailed information of alvinactis_v1_g1058 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_1:17990065...18027026
NR annotation: XP_031550708.1, spectrin beta chain, non-erythrocytic 1-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NRC6Spectrin beta chain, non-erythrocytic 5 OS=Homo sapiens OX=9606 GN=SPTBN5 PE=1 SV=2
Q62261Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2
Q01082Spectrin beta chain, non-erythrocytic 1 OS=Homo sapiens OX=9606 GN=SPTBN1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018SH3_1SH3 domainDomainInterproscan
PF00169PHPH domainDomainInterproscan
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR001452DomainSH3 domainInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR001589Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR001605DomainPleckstrin homology domain, spectrin-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0005543Molecular Functionphospholipid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06115SPTBN1_4_5; spectrin beta, non-erythrocytic 1/4/5-Cytoskeleton proteinsko04812deepkoala

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