Gene detail

Detailed information of alvinactis_v1_g10433 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g10433	DYNEIN HEAVY CHAIN FAMILY PROTEIN	chr_5	7181811	7257605	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g10433

ATGGATACAGAAGTCGAAGAAGCGTTCAATGGTACTTCAAATGCTGATGATAGCAATTCAGATACAACAGCGCTAGAGTCGAGTCTAGCTATCTCAGAAAAGAACAAAAATGGCAGCTCATCTCCAACTGAAAATGGAATCGAGGTGCACGACAATGCAGGAACAGGATCAGTTAATGGACGAGCTAGCTCAGGGACTGAAGCAAAGGAGTTGGATCCAGTAGAAATGATTCCTTTGATTAAAGAAAGAGTGGCACTAAGTTCACTGTCATCTGATTTATGGACAACTGAACATGACGACACGATTTTAAAATTCCTCAAGGACGCTTCCTTTAGAATACTAGTTATATACATTGACAAGCTACTGGGACTACAAGTGTCTGCATCTCTTCCCCCTCACCATGTAGAAGAACTCACATATATCATCAAATCAGAGGACGCCGTTCTCACCCCCGAAAATTTAGACAAAAATCTTCAGTTTGGTACTGTTCACATGAACTATGTGGAGAATTTGCTTCGCTTAATGACAAATGTTTATGCACCATTGTTCTTTGGAAACTCCTCTTGGCCAGACAGCATCAAAAATGACTTTTCTGCCCATGTACATAAATTCATGGCCAATCTGACAGACACCAGATACAAAATGCAGGGCAAAACAGTTCTGTATGTACCTAACGAGAACAACAATCTCAGCAAAGAAGCTGCAGCTAAAAACAAGGAGTTTGTGCAAAGACTAGAAACTGCTATGATACACTGGACAAGACAGATCAAAGAGGTGCTGAGCAGTCAAGATAACTTTGAAACCGCCGAAAACTCTGGTCCTCTTGAGGAAATAGAATTCTGGAGGAGCCGATGTGTTGATCTTTCAGGAATCAGTGACCAACTCAATAAACCAGGAGTAATGAGAATTCAAGGCATTCTAGAACTCTCCAAGTCATCTTATGTGGCTCCATTTCTAAAGCTTGCAAAACAAATCCAGAATGGATCTGCTCAAGCACAAAGCAATCTTAGGTTCTTGTCTGTCCTCAAAGAACCCTGTGAAGCTCTTGCAGAGGCTCAGCCTAAGGATATACCATCCATGCTGCCTAAGATTTTAAACATCATCAGAGTCATATGGGTCAACTCTGAACACTACAAAAGTGCCGAGAGACTTACTGGACTTCTGAGGAAGATGAGCAATGAAATAATCAAGAGATGCAGCACTAAAATCTGTCTTGATGACATATTTGATGGACGTATCAGAATAAGTATGCTGGGACTGCAAGAAAGTATTGAATGCTGTGAAGCATGGAAGGAGATGTATGAAAAGATAAGCAGAATGCATGCAAAGTTCTCTGGTATGCCCTGGGTTCTTGACCAAAGCAGCATATTTGCTCAGGTTGATGCCTTTGTGCAGAGATGCAAGGATCTACTTGAGGTCTGTGAAGGCCAGATGCACTTTGCTAGAATGTATGATGGTGAAAAGACACCACTCCCTTGCTTCCATGGCGTTAAAGGCCCAGAAATTGTCAGAAGTCTTTTAGAGATTGAGGCAACCTTTGAAAAGAACTTACAGATCTTGAAGGTCGTAAAGAAAACTATACTGGATGTCAAGGCAACAACGTGGCATGATGATTTCAATAGGTTCCGTGCTGGTGTCAAAGATTTAGAAGTGATGGTACAGAATCTTATAGCGTCTGCATTTGAGACAGTCACAACGGCACAAGAAGGGGCAGAGATCCTGGATATCTTCCAGCATCTGTCATCTAGAGAGGCCATCAGGAGAACCATTGACAAGAAGACCGTAGAGATATACCAACTGTTCAATGAAGAACTGAACTTGGTCAAGAAGGAGTTCAATACTAAGATTGTTGACCTGCCAGCATTGTATCCAAAGTATGCTGGCTCCTCTAGCTGGGCTAGAATGCTGAGGAGAAGGATTGACAAACCAATGGCTGTTCTTAGCAAGGCATTCTACCTGCCTCAGATTGGCACTGGAGATGAAATAAGAACACAATACCAGCAATTAGCCCAGGCCTTGGATGAATATGTACGAAAGACATTCAATGAATGGACAGCTACAGTGGACAAAGAATCAGTCAAGCTCCTTGAGATACCTCTTATGCGGCGAAGTCAGGACAGAACAGGAACTCTGGATCTGCATTTCGACAAGAATCTCCTGAAGTTGATCAACGAGATTCACTACTGGGAGAAACTCATGTTTGAGACTCCTCACTATGTATCAGAGATTTATCAGAAGAAGGAAGATCTTAGGATTCTACGTGAGAATGTCTTGCTTGTTGTCAGGGATTATAACAGAATCATAGCAGTTCTATCACCAGAAGAACGTGGTCTCTTTAAAGAGAGAATCCGTTCTCTAGACAAGAAGATCCATCCAGGTCTCACTAAACTCACTTGGGCATCTAAGGGTATATCGGATTACTTTATCGGTGAATGCAGAAACAACTGCAGTAAGGTCCAGGGTATTGTTGATGACTACAAGAATGCTAACCTTATGATATCCAAAAGCTGTGTCAAGATAAGTGAGTTGCTGTTGGTGAAAATCGATGGTAAACGAGTCTATGATAACTTGGAGTTTGAAGATGAACAGAAAAACCACATGTCATTGCTTCAAACAAGACTACAAGTGACTCACATCGAGATCGTAGGAACTATGAAGAGTACTTATGAAGTGTTCAGAAGCGATGGACTAGAGGTTCAAGCCCACTGGCTGCGCTATACAGAGAAGATTGACCGCATGGTAGAGGAAGCATTCAGGCTCAATGTTAAGTGGTCATTACAGGAATTATCCAGGGCCATTAACGGTGATGGGAAAAGTATACCCAACCCTTTGCTACGAGTGAAGGTTGTACTGGAAGGAGATAAGGTTGAGTTCTCACCTACGTTGACTAAACTGGCGAGTATGATGGAAAACATTGCAAGCTCACTCACTACCTGTTTATCAGTGTTCAAACGACTTCCAGACCTTCTTACTAAACGAAAGTCTACTAAGGAGCCTGTTCATGCCATCATTGAACGTGATGATGAAACAAAGAAGATCCAGGTCGCCATCAAGACAGGGATGTCAGCTAACGCTTCTCATCTACAGTCATACCTCAGCACGTGGGACACATATCGTGAAATCTGGGAGATTCAGAAAGACGCGTTCATTCGAAGATATCAACGTCTCAATCCACCAGTGTCGTCTTTCGATGCTGACATTGCTCGGTACACAGAGATTGCCAATAACTTCCAGAAAGAAGAGACAGTTCTGAACATTGACTTTGTGATGCTTGACTGTTCACCGCTGAAGTTTGCCTTGTTGAGTCACTGTAATGAATGGCAGAACAAGTTCACTACTCTGCTGAGGGAGATGGCCAGTCAGAAACTCTTAGAACTGCATAGTTTCCTTAAGGACAATGCAAAAAAACTAAGTGCCCCTCCAGAAAACTTAGACGAATTGGGTGATAGTCTAGCGTTGTTAGAACGACTTCAGAATGACTTACACAACATTGAAGCAAAGTTCTCTCCTCTACACGAACAGTTTGTTATTCTCGAGAAATACGAAGTGGCCATACCAGAAGAGGTCCAACAAATGCTTGAGCAGTTGAGTGGTGAGTGGGTGTTGTTCCAGCAGTGCATACTGGACAGCGACGTCATGCTGAAGAAGAGCAAAGAGAAATTCAAGACGGGACTTATCCATTCATCAGAGGAGTTCAAGAAGACTGTCGGTACCTTGTTTGATGAGTTCCAAACCAAGGGTCCGTTTAATAGTGCTATTGCGGTTAAAGAGGCTCTCGAGCAAGTAACTCTGTACCACGAACAAGTCAAAAATCTCAAAAACCAAGAATCGACTCTGCGTCGTGGTTTGAACATCTTTAAGATCGAACAGGCTCCGTCTAAGGATCTACACGCCTTGGAGAAAGATCTAGAACACCTGGAGCAAGTTTGGACCATTACCAAGGAATGGGAGGGTCTGTGGGACTCGTGGAAGGTCGGTCGGTTTGTTGAGCTGGTCACTACAGACATGGAGACGACATCACAGCTGTTATACAAGAGACTGAATAAGACCGTTAGAGAAATCAAGGATAAGAATTGGGACATCTGTGACTCCATCAAAGGTCGTATCGAGCAGTTCAAGAGAACAATGCCACTTATCCAGGATCTCAAGAACCCTGCTATGAGAGACAGACATTGGAGTCAAATCAAAGGAGAAGTTCAGAAACCTTTTGATCATTCAGCGGATGACTTCACTCTTGAGAAAATCATTGAGCTTGGTTTGGATCAGTTTGCTATGCAGATCTCTGATATCTCTGGTGCAGCGAGTAAAGAGTTGTCTATCGAACAAGCAATCGCTAGTATTGCAGAAGCATGGGAAAAAGTCAGCCTTGACATTGGACCGTATAAGGACCGTGGTCACTTTAGACTCAAGGCTACAGATGACGTCTTCCAGTTACTCGAAGACAACCAAGTTACCCTCTCTACAATGAAAGCCTCTAGATACGTCAAAGCCTTTGAGGCTGAGGTTGATAAATGGGAGAGAACTCTTTCTCTGATTCTGGAGGTCATTGAGATGATCTTGACTGTACAGAGACAGTGGATGTACCTGGAGAACATCTTCCTGGGTGAAGACATTAGAAAGCAGCTCCCTCGAGAATCGGCCGAGTTTGACGACGTCAATGGAAACTGGAAAGTCATCATGCAGAGACTTAACAAAGATCCCAACGCCCTTAGAGGAACTCACCACAAAAGTCTGTTAGAGACATTGAATGACATGAACACCAAACTCGAGGAGATCCAGAAATCCCTGGACATGTATCTTGAAACCAAGAGACAAATATTCCCTCGTTTTTACTTCCTGTCGAACGATGACTTGCTGGAGATTCTTGGACAGTCCAAGAACCCCGAAGCGGTCCAGTCACATCTCAAAAAGTGTTTCGATAACATCAAATCTCTTAAAATGGCGAGGATGGGAATCACACAAAAGACCGAAGCAGTTGGTATGTACTCGGCTGACAGTGAATACGTTGAGTTTGGTCACTCTGTACTGCTGGAGGGTCCTGTGGAGGCGTGGCTATGTGACGTGGAGAGAAGTATGAGATGGACTCTGAAGGAATTACTGAAACACTGTCGTCTTGCGTTGAAGAAGAACCTTAGTAAACGCGACAAGTGGGTTAAGGAATGGGCTGGACAGctcacgctaacatcaagccaAATCCAATGGACAAGTGACTGCAATAAAGCACTTAGCAGCACTAAGGAACGAGGGGACAAAAAAGCGCTCAAGAGTCTCAAAAAGAAACAGGTCTCCATGCTCAACAAGTTCTCTGACATGATTCGTGGCAACCTGACCAAACTGCAGCGTCTGAAAATCGTTGCCTTAGTAACCATTGAGGTCCATGGTCGTGACGTCATCGAGAAGCTTATCAAGTCGGGATGTAGTGACGTGTCTGCATTTGAATGGCTTAGTCAGCTACGTCTGTACTGGGATAAGGACATTGATGATTGTGTTGTACGTCAAACAAACACCCAGTTTCAGTACGGCTATGAGTATTTAGGAAACTCTGGTCGTCTGGTCATCACTCCTTTGACAGACAGGTGTTATATGACCCTCACTACAGCACTCCATCTTCATCGAGGGGGTAGTCCCAAAGGACCTGCCGGTACTGGCAAAACTGAGACCGTAAAGGATCTTGGGAAAGCTCTCGGCAATTACGTCATTGTGGTCAACTGTTCCGAGGGTCTTGACTTCAAGAGCATGGGTCGTATGTACAGTGGTTTGGCACAGACTGGTGCCTGGGGCTGCTTTGACGAGTTTAATCGTATCAACATCGAGGTACTGTCTGTAGTTGCACAGCAGATCCTGTCCATCCTGTCAGCACTTTCAGCAGGCGCCACACGCTTTGTGTTTGAAGGACGTGAGATCAACCTGGTGTGGTCGTGTGGAATATTCATTACAATGAACCCTGGTTACGCTGGTCGTACCGAGTTACCAGATAACTTAAAGAGTATGTTTAGACCCATCTCTATGTGCGTACCTGACTCGGGGATGATCGCTGAAATTATCCTCTTTGCTGAAGGCTTCAGCAACACCAAGATCCTACTGATGTCTATGAAGGACATGAACATTGCTAAGCTGACCTCACAGGATACACCGCTGTTCAATGGCATCGTGTCTGATCTGTTTCCTGGAGTAGAGGCACCAGTTATTGACTATGGAAAGATGCGTTCTGCAATAGAAAAGGAGCTGAGAGAAAATGGTCTACAAGCGACTAATGCAACAGTCTTGAAGATCATTCAATTGTACGAAACCAAGAATTCAAGACATTCCACCATGTTGGTAGGACAGACTGGTTCAGGGAAGAGTGTGTGTTGGCGTACCTTACAGAGAGCCGTGACCAGGATGAAAAGGGACGGTGAATCTGGTTTCAATGTCGTTAGGGAATTTCCCATCAACCCTAAGGCGTTGTCCCTTGGTGAGTTGTACGGAGAATTTGACTTGAATACCAACGAATGGACAGATGGTGTGTTGTCAAGTGTCATGAGACAAACCTGTGCAGATGAAAAGTCTGACGAGAAGTGGATTCTGTTCGATGCTCCAGTAGATACTTTGTGGATTGAATCCATGAACTCAGTCATGGACGACAACAAGGTGTTGACACTCATCAACGGTGAACGTATCAGTATGCCTGAACAGGTATCGTTGCTGTTCGAAGTAGAGAACTTAGCTGTTGCCTCACCTGCTACCGTAAGTCGTTGTGGTATGGTATACACTGACTACAAGGACCTTGGATGGCAACCTTACGTTGACTCATGGCTGGACAGACAACCAGACAAACAGTCTGTTGAACATCTACAAAGACTCTTTGAAGTTTGTTCCCAAAGTGCTGGAGTTTAA

Transcript

alvinactis_v1_g10433

Protein

alvinactis_v1_g10433

MDTEVEEAFNGTSNADDSNSDTTALESSLAISEKNKNGSSSPTENGIEVHDNAGTGSVNGRASSGTEAKELDPVEMIPLIKERVALSSLSSDLWTTEHDDTILKFLKDASFRILVIYIDKLLGLQVSASLPPHHVEELTYIIKSEDAVLTPENLDKNLQFGTVHMNYVENLLRLMTNVYAPLFFGNSSWPDSIKNDFSAHVHKFMANLTDTRYKMQGKTVLYVPNENNNLSKEAAAKNKEFVQRLETAMIHWTRQIKEVLSSQDNFETAENSGPLEEIEFWRSRCVDLSGISDQLNKPGVMRIQGILELSKSSYVAPFLKLAKQIQNGSAQAQSNLRFLSVLKEPCEALAEAQPKDIPSMLPKILNIIRVIWVNSEHYKSAERLTGLLRKMSNEIIKRCSTKICLDDIFDGRIRISMLGLQESIECCEAWKEMYEKISRMHAKFSGMPWVLDQSSIFAQVDAFVQRCKDLLEVCEGQMHFARMYDGEKTPLPCFHGVKGPEIVRSLLEIEATFEKNLQILKVVKKTILDVKATTWHDDFNRFRAGVKDLEVMVQNLIASAFETVTTAQEGAEILDIFQHLSSREAIRRTIDKKTVEIYQLFNEELNLVKKEFNTKIVDLPALYPKYAGSSSWARMLRRRIDKPMAVLSKAFYLPQIGTGDEIRTQYQQLAQALDEYVRKTFNEWTATVDKESVKLLEIPLMRRSQDRTGTLDLHFDKNLLKLINEIHYWEKLMFETPHYVSEIYQKKEDLRILRENVLLVVRDYNRIIAVLSPEERGLFKERIRSLDKKIHPGLTKLTWASKGISDYFIGECRNNCSKVQGIVDDYKNANLMISKSCVKISELLLVKIDGKRVYDNLEFEDEQKNHMSLLQTRLQVTHIEIVGTMKSTYEVFRSDGLEVQAHWLRYTEKIDRMVEEAFRLNVKWSLQELSRAINGDGKSIPNPLLRVKVVLEGDKVEFSPTLTKLASMMENIASSLTTCLSVFKRLPDLLTKRKSTKEPVHAIIERDDETKKIQVAIKTGMSANASHLQSYLSTWDTYREIWEIQKDAFIRRYQRLNPPVSSFDADIARYTEIANNFQKEETVLNIDFVMLDCSPLKFALLSHCNEWQNKFTTLLREMASQKLLELHSFLKDNAKKLSAPPENLDELGDSLALLERLQNDLHNIEAKFSPLHEQFVILEKYEVAIPEEVQQMLEQLSGEWVLFQQCILDSDVMLKKSKEKFKTGLIHSSEEFKKTVGTLFDEFQTKGPFNSAIAVKEALEQVTLYHEQVKNLKNQESTLRRGLNIFKIEQAPSKDLHALEKDLEHLEQVWTITKEWEGLWDSWKVGRFVELVTTDMETTSQLLYKRLNKTVREIKDKNWDICDSIKGRIEQFKRTMPLIQDLKNPAMRDRHWSQIKGEVQKPFDHSADDFTLEKIIELGLDQFAMQISDISGAASKELSIEQAIASIAEAWEKVSLDIGPYKDRGHFRLKATDDVFQLLEDNQVTLSTMKASRYVKAFEAEVDKWERTLSLILEVIEMILTVQRQWMYLENIFLGEDIRKQLPRESAEFDDVNGNWKVIMQRLNKDPNALRGTHHKSLLETLNDMNTKLEEIQKSLDMYLETKRQIFPRFYFLSNDDLLEILGQSKNPEAVQSHLKKCFDNIKSLKMARMGITQKTEAVGMYSADSEYVEFGHSVLLEGPVEAWLCDVERSMRWTLKELLKHCRLALKKNLSKRDKWVKEWAGQLTLTSSQIQWTSDCNKALSSTKERGDKKALKSLKKKQVSMLNKFSDMIRGNLTKLQRLKIVALVTIEVHGRDVIEKLIKSGCSDVSAFEWLSQLRLYWDKDIDDCVVRQTNTQFQYGYEYLGNSGRLVITPLTDRCYMTLTTALHLHRGGSPKGPAGTGKTETVKDLGKALGNYVIVVNCSEGLDFKSMGRMYSGLAQTGAWGCFDEFNRINIEVLSVVAQQILSILSALSAGATRFVFEGREINLVWSCGIFITMNPGYAGRTELPDNLKSMFRPISMCVPDSGMIAEIILFAEGFSNTKILLMSMKDMNIAKLTSQDTPLFNGIVSDLFPGVEAPVIDYGKMRSAIEKELRENGLQATNATVLKIIQLYETKNSRHSTMLVGQTGSGKSVCWRTLQRAVTRMKRDGESGFNVVREFPINPKALSLGELYGEFDLNTNEWTDGVLSSVMRQTCADEKSDEKWILFDAPVDTLWIESMNSVMDDNKVLTLINGERISMPEQVSLLFEVENLAVASPATVSRCGMVYTDYKDLGWQPYVDSWLDRQPDKQSVEHLQRLFEVCSQSAGV*

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07728	AAA_5	AAA domain (dynein-related subfamily)	Domain	Interproscan
PF08385	DHC_N1	Dynein heavy chain, N-terminal region 1	Family	Interproscan
PF08393	DHC_N2	Dynein heavy chain, N-terminal region 2	Family	Interproscan
PF12774	AAA_6	Hydrolytic ATP binding site of dynein motor region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011704	Domain	ATPase, dynein-related, AAA domain	Interproscan
IPR013594	Domain	Dynein heavy chain, tail	Interproscan
IPR013602	Domain	Dynein heavy chain, linker	Interproscan
IPR026983	Family	Dynein heavy chain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR035699	Domain	Dynein heavy chain, hydrolytic ATP-binding dynein motor region	Interproscan
IPR042222	Homologous_superfamily	Dynein heavy chain, domain 2, N-terminal	Interproscan
IPR042228	Homologous_superfamily	Dynein heavy chain, linker, subdomain 3	Interproscan
IPR043157	Homologous_superfamily	Dynein heavy chain, AAA1 domain, small subdomain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10676	DYNEIN HEAVY CHAIN FAMILY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005930	Cellular Component	axoneme	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008569	Molecular Function	minus-end-directed microtubule motor activity	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0030286	Cellular Component	dynein complex	Interproscan
GO:0045505	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959	Molecular Function	dynein light intermediate chain binding	Interproscan
GO:0060294	Biological Process	cilium movement involved in cell motility	Interproscan
GO:0097729	Cellular Component	9+2 motile cilium	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-